Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0091g00690.t01 | Wine grape | nucleus | 58.37 | 57.87 |
| VIT_18s0001g09230.t01 | Wine grape | nucleus | 55.36 | 55.36 |
| CDY02102 | Canola | nucleus | 36.05 | 53.16 |
| CDX81313 | Canola | nucleus | 40.77 | 51.08 |
| CDY23027 | Canola | nucleus | 35.62 | 48.82 |
| CDY18661 | Canola | nucleus | 41.63 | 46.86 |
| AT3G49930.1 | Thale cress | nucleus | 42.92 | 46.51 |
| CDY43576 | Canola | nucleus | 41.63 | 46.41 |
| Bra012914.1-P | Field mustard | nucleus | 42.06 | 46.01 |
| CDY37851 | Canola | nucleus | 42.06 | 45.58 |
| Bra029985.1-P | Field mustard | nucleus | 42.92 | 45.25 |
| CDX83103 | Canola | nucleus | 42.92 | 45.05 |
| CDX68558 | Canola | nucleus | 42.06 | 44.14 |
| CDX68559 | Canola | nucleus | 42.49 | 44.0 |
| CDY08718 | Canola | nucleus | 44.64 | 43.15 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 37.77 | 43.14 |
| Bra037845.1-P | Field mustard | nucleus | 42.49 | 42.86 |
| Bra024448.1-P | Field mustard | nucleus | 44.21 | 42.74 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 39.91 | 42.47 |
| CDY36493 | Canola | nucleus | 43.78 | 42.32 |
| Bra031834.1-P | Field mustard | nucleus | 42.49 | 42.13 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 39.06 | 41.36 |
| AT5G67450.1 | Thale cress | nucleus | 42.49 | 40.41 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 41.63 | 40.25 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 37.77 | 40.18 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 41.2 | 40.17 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 40.77 | 39.92 |
| Os03t0610400-01 | Rice | nucleus | 38.2 | 37.4 |
| Os12t0583700-00 | Rice | nucleus | 39.06 | 36.84 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 38.63 | 36.44 |
| Zm00001d030858_P001 | Maize | nucleus | 36.48 | 30.69 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 35.19 | 29.71 |
| EES16240 | Sorghum | nucleus | 36.05 | 28.97 |
| VIT_15s0021g02720.t01 | Wine grape | nucleus | 33.48 | 21.73 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 23.61 | 17.03 |
Protein Annotations
| EntrezGene:100264451 | wikigene:100264451 | MapMan:15.5.15 | Gene3D:3.30.160.60 | ProteinID:CCB57749 | ProteinID:CCB57749.1 |
| UniProt:F6HST9 | EMBL:FN596246 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | EntrezGene:LOC100264451 | wikigene:LOC100264451 |
| PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF319 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0001983AEB | ArrayExpress:VIT_07s0129g00240 | EnsemblPlantsGene:VIT_07s0129g00240 | EnsemblPlants:VIT_07s0129g00240.t01 | RefSeq:XP_002279570 |
| RefSeq:XP_002279570.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:+:15505670..15506797
Molecular Weight (calculated)
25009.1 Da
IEP (calculated)
7.606
GRAVY (calculated)
-0.656
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLNSPT AATTVQFHHD SDLDYLEPWT KRKRSKRPRL DNPPTEEEYL ALCLIMLAQG GRGDVATQLR HHSPPPPPPA LTLSYKCSVC NKAFPSYQAL
101: GGHKASHRKL AGIEDQPTTA GTSNASNALP SVNTSGKIHE CSICHKTFSS GQALGGHKRC HYDSGSNGGS SGDGAITWSD GTRWSHSHRD FDLNLPALPG
201: FSPAPCVDRG GKSQLPCEEE VESPLSAKHH PGV
101: GGHKASHRKL AGIEDQPTTA GTSNASNALP SVNTSGKIHE CSICHKTFSS GQALGGHKRC HYDSGSNGGS SGDGAITWSD GTRWSHSHRD FDLNLPALPG
201: FSPAPCVDRG GKSQLPCEEE VESPLSAKHH PGV
001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
Arabidopsis Description
AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.