Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G076400.1 | Wheat | nucleus | 94.12 | 93.72 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 93.7 | 92.53 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 53.78 | 58.45 |
| Os12t0583700-00 | Rice | nucleus | 56.3 | 54.25 |
| CDY02102 | Canola | nucleus | 30.25 | 45.57 |
| CDY22361 | Canola | nucleus | 34.87 | 44.86 |
| Bra033666.1-P | Field mustard | nucleus | 34.03 | 43.78 |
| CDX81313 | Canola | nucleus | 34.03 | 43.55 |
| CDY23027 | Canola | nucleus | 31.09 | 43.53 |
| CDY30794 | Canola | nucleus | 34.45 | 43.39 |
| PGSC0003DMT400091896 | Potato | nucleus | 34.45 | 43.16 |
| KRH61394 | Soybean | nucleus | 42.02 | 42.92 |
| Zm00001d030858_P001 | Maize | nucleus | 49.58 | 42.6 |
| PGSC0003DMT400030168 | Potato | nucleus | 37.4 | 42.58 |
| VIT_03s0091g00690.t01 | Wine grape | nucleus | 41.6 | 42.13 |
| KRH52082 | Soybean | nucleus | 41.18 | 42.06 |
| VIT_18s0001g09230.t01 | Wine grape | nucleus | 40.76 | 41.63 |
| KRH05601 | Soybean | nucleus | 41.6 | 41.25 |
| Solyc12g088390.1.1 | Tomato | nucleus | 34.45 | 41.0 |
| AT5G43170.1 | Thale cress | nucleus | 33.19 | 40.93 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 39.92 | 40.77 |
| KRH15443 | Soybean | nucleus | 39.92 | 40.77 |
| EES16240 | Sorghum | nucleus | 49.58 | 40.69 |
| TraesCS2D01G193900.1 | Wheat | nucleus | 36.97 | 40.37 |
| CDY43576 | Canola | nucleus | 34.87 | 39.71 |
| AT3G49930.1 | Thale cress | nucleus | 35.71 | 39.53 |
| CDY18661 | Canola | nucleus | 33.61 | 38.65 |
| CDX70236 | Canola | nucleus, plastid | 36.97 | 38.6 |
| Bra009464.1-P | Field mustard | plastid | 36.97 | 38.6 |
| CDY03945 | Canola | nucleus | 37.4 | 38.53 |
| Bra012914.1-P | Field mustard | nucleus | 34.45 | 38.5 |
| Bra029985.1-P | Field mustard | nucleus | 35.71 | 38.46 |
| CDX84907 | Canola | nucleus | 36.97 | 38.43 |
| PGSC0003DMT400055391 | Potato | nucleus | 31.09 | 38.34 |
| CDX68558 | Canola | nucleus | 35.71 | 38.29 |
| CDX68559 | Canola | nucleus | 36.13 | 38.22 |
| CDY51312 | Canola | nucleus | 35.29 | 38.18 |
| Bra032845.1-P | Field mustard | nucleus | 36.55 | 37.99 |
| CDY27629 | Canola | nucleus | 36.55 | 37.99 |
| AT1G27730.1 | Thale cress | nucleus | 36.13 | 37.89 |
| CDX83103 | Canola | nucleus | 35.29 | 37.84 |
| Bra022436.1-P | Field mustard | nucleus | 42.44 | 37.83 |
| Bra010922.1-P | Field mustard | nucleus | 36.97 | 37.77 |
| CDY11770 | Canola | nucleus | 36.97 | 37.77 |
| CDX90105 | Canola | nucleus | 36.97 | 37.77 |
| Solyc04g077980.1.1 | Tomato | nucleus, plastid | 41.18 | 37.69 |
| CDY37851 | Canola | nucleus | 34.03 | 37.67 |
| CDX99202 | Canola | nucleus | 42.02 | 37.59 |
| TraesCS7D01G161800.1 | Wheat | nucleus | 32.77 | 37.5 |
| KRH35675 | Soybean | nucleus | 40.34 | 37.35 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 38.66 | 37.25 |
| CDY46162 | Canola | nucleus | 41.6 | 37.08 |
| KRG91102 | Soybean | nucleus | 40.34 | 36.92 |
| CDX95435 | Canola | nucleus | 40.34 | 36.78 |
| TraesCS2D01G088100.1 | Wheat | nucleus | 29.83 | 36.22 |
| AT5G04340.1 | Thale cress | nucleus | 36.13 | 36.13 |
| Bra038219.1-P | Field mustard | nucleus | 39.92 | 35.98 |
| CDY65161 | Canola | nucleus | 40.34 | 35.82 |
| CDX82290 | Canola | nucleus | 40.34 | 35.69 |
| CDY42192 | Canola | nucleus | 39.5 | 35.61 |
| Bra001752.1-P | Field mustard | nucleus | 39.92 | 35.58 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 34.45 | 35.5 |
| Bra037845.1-P | Field mustard | nucleus | 34.03 | 35.06 |
| Bra031834.1-P | Field mustard | nucleus | 34.03 | 34.47 |
| AT3G19580.1 | Thale cress | nucleus | 39.5 | 34.43 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 39.5 | 34.06 |
| CDY08718 | Canola | nucleus | 34.45 | 34.02 |
| Bra024448.1-P | Field mustard | nucleus | 34.45 | 34.02 |
| PGSC0003DMT400084751 | Potato | nucleus | 36.97 | 33.59 |
| AT5G67450.1 | Thale cress | nucleus | 34.45 | 33.47 |
| CDY36493 | Canola | nucleus | 33.61 | 33.2 |
| PGSC0003DMT400040388 | Potato | cytosol | 28.99 | 32.55 |
| PGSC0003DMT400072661 | Potato | nucleus | 35.29 | 32.43 |
| PGSC0003DMT400085102 | Potato | nucleus | 29.41 | 31.11 |
| PGSC0003DMT400006126 | Potato | nucleus | 37.4 | 30.9 |
| TraesCS5D01G411400.1 | Wheat | nucleus | 42.02 | 30.03 |
| PGSC0003DMT400095976 | Potato | nucleus | 28.99 | 28.99 |
| Solyc01g107170.2.1 | Tomato | nucleus | 36.97 | 28.39 |
| PGSC0003DMT400024799 | Potato | cytosol | 21.85 | 26.67 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 27.31 | 20.63 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 25.21 | 19.54 |
| TraesCS1D01G214900.1 | Wheat | nucleus | 26.47 | 18.48 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G082700.1 | EnsemblPlantsGene:TraesCS5D01G082700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr5D:+:84680033..84681139
Molecular Weight (calculated)
24400.8 Da
IEP (calculated)
8.835
GRAVY (calculated)
-0.326
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAVLEAA TMRPSPPSKE MEASTSTSEE ASALLGQAEG WSKRKRSRRP RALDPSEEYL ALCLLMLAHG HRDSATAAAP EQQHGCSVCG KVFASYQALG
101: GHKASHRKPT AAPAGAADQK PQAAVAAASL SGSGEAAAGA GGGKVHECNV CRKTFPTGQA LGGHKRCHYD GTIGSAAAGP THKLAAKAAA ASATAASRGF
201: DLNLPALPDI PERRAVTEDG EEVLSPVSFK KPRLMLTA
101: GHKASHRKPT AAPAGAADQK PQAAVAAASL SGSGEAAAGA GGGKVHECNV CRKTFPTGQA LGGHKRCHYD GTIGSAAAGP THKLAAKAAA ASATAASRGF
201: DLNLPALPDI PERRAVTEDG EEVLSPVSFK KPRLMLTA
001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
Arabidopsis Description
AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.