CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35675	Soybean	nucleus	90.77	91.83
VIT_18s0001g09230.t01	Wine grape	nucleus	49.62	55.36
KRH15443	Soybean	nucleus	46.54	51.93
KRH52082	Soybean	nucleus	46.15	51.5
KRH05601	Soybean	nucleus	46.92	50.83
KRH61394	Soybean	nucleus	45.38	50.64
TraesCS4A01G236000.1	Wheat	nucleus	38.08	48.53
TraesCS4B01G079000.1	Wheat	nucleus	38.85	45.91
HORVU4Hr1G013460.1	Barley	nucleus	37.69	44.75
TraesCS4D01G077900.1	Wheat	nucleus	36.92	43.84
Os12t0583700-00	Rice	nucleus	39.62	41.7
TraesCS5B01G076400.1	Wheat	nucleus	37.69	41.0
TraesCS5A01G070600.1	Wheat	nucleus	37.69	40.66
TraesCS5D01G082700.1	Wheat	nucleus	36.92	40.34
Os03t0610400-01	Rice	nucleus	35.0	38.24
GSMUA_Achr5P08730_001	Banana	nucleus	36.15	38.06
Zm00001d030858_P001	Maize	nucleus	35.77	33.57
EES16240	Sorghum	nucleus	36.54	32.76
GSMUA_Achr6P24730_001	Banana	nucleus	33.46	31.52
KRH04135	Soybean	nucleus	22.69	22.43
KRH57408	Soybean	nucleus	21.54	21.13
KRH28087	Soybean	nucleus	22.69	20.49
KRH77360	Soybean	nucleus	22.31	19.46
KRH76140	Soybean	nucleus	26.15	18.63
KRH39952	Soybean	nucleus	21.92	18.63
KRH65408	Soybean	nucleus	26.54	17.78
KRH75355	Soybean	nucleus	25.0	16.71

Protein Annotations

EntrezGene:100819484	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02012661	EnsemblPlantsGene:GLYMA_20G133200	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0008150	GO:GO:0009719	GO:GO:0010200	UniProt:I1NG21	InterPro:IPR013087	EnsemblPlants:KRG91102
ProteinID:KRG91102	ProteinID:KRG91102.1	EMBL:KT031153	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157
PANTHER:PTHR26374	PANTHER:PTHR26374:SF263	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0001B36AA4	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:37332170..37333749

Molecular Weight (calculated)

27947.1 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.780

Length

260 amino acids

Sequence
(BLAST)

001: MALEALNSPT AATTPFRGYQ EEEEDEEADL HLREPWAKRK RSKRPRFETE EEYLALCLIM LAQSGNTRNI HNNNTQLPSS SLSDKEASPP VKLTHRCTVC
101: NKAFGSYQAL GGHKASHRKA SSESNPTASV SALANDSVSA STVGGGRMHE CSICHKSFPT GQALGGHKRC HYDGGNNHSN SNANGNNSSG ATTSDGGAAS
201: SSHTLRGFDL NLPAPLTEFW SPMGFDFGKK KVGGEQEVES PLPVTAKRPR LFTGEDDETA

Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)

001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL

Arabidopsis Description

ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.