Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH52082 | Soybean | nucleus | 92.7 | 92.7 |
KRH15443 | Soybean | nucleus | 62.23 | 62.23 |
KRH05601 | Soybean | nucleus | 60.52 | 58.75 |
VIT_03s0091g00690.t01 | Wine grape | nucleus | 57.51 | 57.02 |
KRH35675 | Soybean | nucleus | 51.5 | 46.69 |
TraesCS4A01G236000.1 | Wheat | nucleus | 39.91 | 45.59 |
KRG91102 | Soybean | nucleus | 50.64 | 45.38 |
TraesCS4B01G079000.1 | Wheat | nucleus | 41.2 | 43.64 |
TraesCS5A01G070600.1 | Wheat | nucleus | 44.64 | 43.15 |
TraesCS5B01G076400.1 | Wheat | nucleus | 43.78 | 42.68 |
HORVU4Hr1G013460.1 | Barley | nucleus | 39.91 | 42.47 |
TraesCS4D01G077900.1 | Wheat | nucleus | 39.91 | 42.47 |
TraesCS5D01G082700.1 | Wheat | nucleus | 42.92 | 42.02 |
Os12t0583700-00 | Rice | nucleus | 42.06 | 39.68 |
Os03t0610400-01 | Rice | nucleus | 39.91 | 39.08 |
GSMUA_Achr5P08730_001 | Banana | nucleus | 37.34 | 35.22 |
Zm00001d030858_P001 | Maize | nucleus | 37.34 | 31.41 |
EES16240 | Sorghum | nucleus | 38.63 | 31.03 |
GSMUA_Achr6P24730_001 | Banana | nucleus | 36.48 | 30.8 |
KRH04135 | Soybean | nucleus | 25.32 | 22.43 |
KRH57408 | Soybean | nucleus | 24.03 | 21.13 |
KRH28087 | Soybean | nucleus | 25.75 | 20.83 |
KRH77360 | Soybean | nucleus | 24.46 | 19.13 |
KRH39952 | Soybean | nucleus | 24.89 | 18.95 |
KRH76140 | Soybean | nucleus | 27.9 | 17.81 |
KRH65408 | Soybean | nucleus | 27.9 | 16.75 |
KRH75355 | Soybean | nucleus | 27.9 | 16.71 |
Protein Annotations
EntrezGene:100800095 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02002162 | EnsemblPlantsGene:GLYMA_04G044900 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0008150 | GO:GO:0009719 | GO:GO:0010200 | UniProt:I1JTQ3 | InterPro:IPR013087 | EnsemblPlants:KRH61394 |
ProteinID:KRH61394 | ProteinID:KRH61394.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
PANTHER:PTHR26374:SF319 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0001B36BCE | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:3586957..3589247
Molecular Weight (calculated)
24995.2 Da
IEP (calculated)
8.492
GRAVY (calculated)
-0.551
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALQSPR TATPSFSPFE ETNLSYLETP WTKGKRSKRS RMEQQLQHSS CTEEEYLALC LIMLAHGGAG GVPAAKPAVS DNNSAPLPAA KLSYKCSVCN
101: KAFSSYQALG GHKASHRKLG GEHHSTSSAV TTSSASNGGA RTHECSICQK TFPTGQALGG HKRCHYEGGN SAVTASEGVG STHTGSHRDF DLNLPAFPDF
201: STRFFVDDEV TSPHPSKKSR LNLTIPKIEI PQY
101: KAFSSYQALG GHKASHRKLG GEHHSTSSAV TTSSASNGGA RTHECSICQK TFPTGQALGG HKRCHYEGGN SAVTASEGVG STHTGSHRDF DLNLPAFPDF
201: STRFFVDDEV TSPHPSKKSR LNLTIPKIEI PQY
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.