Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G082700.1 | Wheat | nucleus | 92.53 | 93.7 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 92.53 | 93.31 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 51.45 | 60.78 |
| Os12t0583700-00 | Rice | nucleus | 56.43 | 55.06 |
| CDY02102 | Canola | nucleus | 30.29 | 46.2 |
| CDY22361 | Canola | nucleus | 35.27 | 45.95 |
| Bra033666.1-P | Field mustard | nucleus | 34.44 | 44.86 |
| KRH61394 | Soybean | nucleus | 43.15 | 44.64 |
| CDY30794 | Canola | nucleus | 34.85 | 44.44 |
| CDY23027 | Canola | nucleus | 31.12 | 44.12 |
| CDX81313 | Canola | nucleus | 34.02 | 44.09 |
| KRH52082 | Soybean | nucleus | 42.32 | 43.78 |
| PGSC0003DMT400091896 | Potato | nucleus | 34.44 | 43.68 |
| Zm00001d030858_P001 | Maize | nucleus | 48.96 | 42.6 |
| PGSC0003DMT400030168 | Potato | nucleus | 36.93 | 42.58 |
| VIT_03s0091g00690.t01 | Wine grape | nucleus | 41.49 | 42.55 |
| VIT_18s0001g09230.t01 | Wine grape | nucleus | 40.66 | 42.06 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 40.25 | 41.63 |
| Solyc12g088390.1.1 | Tomato | nucleus | 34.44 | 41.5 |
| AT5G43170.1 | Thale cress | nucleus | 33.2 | 41.45 |
| EES16240 | Sorghum | nucleus | 49.79 | 41.38 |
| KRH15443 | Soybean | nucleus | 39.83 | 41.2 |
| CDY43576 | Canola | nucleus | 35.68 | 41.15 |
| KRH05601 | Soybean | nucleus | 40.66 | 40.83 |
| AT3G49930.1 | Thale cress | nucleus | 35.27 | 39.53 |
| CDX70236 | Canola | nucleus, plastid | 37.34 | 39.47 |
| Bra009464.1-P | Field mustard | plastid | 37.34 | 39.47 |
| Bra012914.1-P | Field mustard | nucleus | 34.85 | 39.44 |
| CDY03945 | Canola | nucleus | 37.76 | 39.39 |
| CDY18661 | Canola | nucleus | 33.61 | 39.13 |
| CDY51312 | Canola | nucleus | 35.68 | 39.09 |
| TraesCS2A01G193900.1 | Wheat | nucleus | 35.68 | 39.09 |
| CDY37851 | Canola | nucleus | 34.85 | 39.07 |
| Bra022436.1-P | Field mustard | nucleus | 43.15 | 38.95 |
| Bra029985.1-P | Field mustard | nucleus | 35.68 | 38.91 |
| CDX84907 | Canola | nucleus | 36.93 | 38.86 |
| AT1G27730.1 | Thale cress | nucleus | 36.51 | 38.77 |
| CDX68558 | Canola | nucleus | 35.68 | 38.74 |
| CDX99202 | Canola | nucleus | 42.74 | 38.72 |
| CDX68559 | Canola | nucleus | 36.1 | 38.67 |
| KRH35675 | Soybean | nucleus | 41.08 | 38.52 |
| Bra032845.1-P | Field mustard | nucleus | 36.51 | 38.43 |
| CDY27629 | Canola | nucleus | 36.51 | 38.43 |
| CDX83103 | Canola | nucleus | 35.27 | 38.29 |
| CDY46162 | Canola | nucleus | 42.32 | 38.2 |
| CDX90105 | Canola | nucleus | 36.93 | 38.2 |
| Bra010922.1-P | Field mustard | nucleus | 36.93 | 38.2 |
| CDY11770 | Canola | nucleus | 36.93 | 38.2 |
| PGSC0003DMT400055391 | Potato | nucleus | 30.29 | 37.82 |
| KRG91102 | Soybean | nucleus | 40.66 | 37.69 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 38.59 | 37.65 |
| Solyc04g077980.1.1 | Tomato | nucleus, plastid | 40.25 | 37.31 |
| CDX95435 | Canola | nucleus | 40.25 | 37.16 |
| CDY65161 | Canola | nucleus | 40.66 | 36.57 |
| AT5G04340.1 | Thale cress | nucleus | 36.1 | 36.55 |
| CDX82290 | Canola | nucleus | 40.66 | 36.43 |
| Bra038219.1-P | Field mustard | nucleus | 39.83 | 36.36 |
| Bra001752.1-P | Field mustard | nucleus | 40.25 | 36.33 |
| CDY42192 | Canola | nucleus | 39.42 | 35.98 |
| TraesCS7A01G160700.2 | Wheat | nucleus | 31.95 | 35.81 |
| Bra031834.1-P | Field mustard | nucleus | 34.85 | 35.74 |
| Bra037845.1-P | Field mustard | nucleus | 34.02 | 35.5 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 34.02 | 35.5 |
| TraesCS2A01G090200.1 | Wheat | nucleus | 28.63 | 35.2 |
| AT3G19580.1 | Thale cress | nucleus | 39.83 | 35.16 |
| CDY08718 | Canola | nucleus | 34.85 | 34.85 |
| Bra024448.1-P | Field mustard | nucleus | 34.85 | 34.85 |
| AT5G67450.1 | Thale cress | nucleus | 34.85 | 34.29 |
| CDY36493 | Canola | nucleus | 34.02 | 34.02 |
| PGSC0003DMT400084751 | Potato | nucleus | 36.51 | 33.59 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 38.17 | 33.33 |
| PGSC0003DMT400040388 | Potato | cytosol | 29.05 | 33.02 |
| PGSC0003DMT400072661 | Potato | nucleus | 34.85 | 32.43 |
| PGSC0003DMT400085102 | Potato | nucleus | 29.05 | 31.11 |
| PGSC0003DMT400006126 | Potato | nucleus | 36.51 | 30.56 |
| TraesCS5A01G401200.1 | Wheat | nucleus | 41.49 | 30.3 |
| PGSC0003DMT400095976 | Potato | nucleus | 28.63 | 28.99 |
| Solyc01g107170.2.1 | Tomato | nucleus | 36.93 | 28.71 |
| PGSC0003DMT400024799 | Potato | cytosol | 21.58 | 26.67 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 26.14 | 21.43 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 25.31 | 19.43 |
| TraesCS1A01G211800.1 | Wheat | nucleus | 25.31 | 18.26 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G070600.1 | EnsemblPlantsGene:TraesCS5A01G070600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr5A:+:79152400..79153555
Molecular Weight (calculated)
24485.0 Da
IEP (calculated)
8.084
GRAVY (calculated)
-0.223
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAVLEAA AMVPSPPSKE MEASSSTSEE ASALLGQAEG WSKRKRSRRP RALAPSEEEY LALCLLMLAH GHRDSAPAAA SEQQHGCSVC GKVFASYQAL
101: GGHKASHRKP TAAPAGAEDL KPQAAVAAAA ASSSGSGEAA VGAGGGKLHE CNVCRKTFPT GQALGGHKRC HYDGTIGSAA AGPAHKLAAK ATAASATAAS
201: RGFDLNLPAL PDIPERCAVT EDGEEVLSPV SLKKPRLMLT A
101: GGHKASHRKP TAAPAGAEDL KPQAAVAAAA ASSSGSGEAA VGAGGGKLHE CNVCRKTFPT GQALGGHKRC HYDGTIGSAA AGPAHKLAAK ATAASATAAS
201: RGFDLNLPAL PDIPERCAVT EDGEEVLSPV SLKKPRLMLT A
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.