Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G193900.1 | Wheat | nucleus | 94.55 | 95.41 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 95.0 | 95.0 |
| OQU90180 | Sorghum | nucleus, plastid | 62.73 | 57.74 |
| Zm00001d021992_P001 | Maize | nucleus | 53.18 | 53.42 |
| Zm00001d021990_P001 | Maize | nucleus | 53.18 | 53.42 |
| Zm00001d020427_P001 | Maize | nucleus | 26.36 | 47.93 |
| Zm00001d012094_P001 | Maize | nucleus | 26.82 | 42.75 |
| Zm00001d043882_P001 | Maize | nucleus | 43.18 | 40.43 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 35.91 | 38.73 |
| Zm00001d006735_P001 | Maize | nucleus | 33.18 | 37.44 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 39.09 | 35.68 |
| Zm00001d006736_P001 | Maize | mitochondrion, nucleus, plastid | 35.0 | 32.22 |
| TraesCS2A01G090200.1 | Wheat | nucleus | 26.82 | 30.1 |
| Zm00001d043884_P001 | Maize | nucleus | 26.82 | 29.95 |
| TraesCS7A01G160700.2 | Wheat | nucleus | 29.09 | 29.77 |
| TraesCS5A01G401200.1 | Wheat | nucleus | 35.91 | 23.94 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 24.09 | 18.03 |
| TraesCS1A01G211800.1 | Wheat | nucleus | 26.36 | 17.37 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 22.73 | 15.92 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G193900.1 | EnsemblPlantsGene:TraesCS2A01G193900 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF328 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr2A:-:162068671..162070126
Molecular Weight (calculated)
22195.1 Da
IEP (calculated)
8.910
GRAVY (calculated)
-0.501
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDDVSRKS PVPPPSPPPM DSWARGGRRS RPRGGGGSGS ASSGGAAESE EEYLALSLLM LSRGVRGEVE DGGFGGVKGV GAAPTKAQGY ECSVCGKVYA
101: SYQALGGHKT SHRKPPTPPA ASAGGDEASG GAPVEAKVHQ CSLCHRTFPS GQALGGHKRL HYEGGAAGAG TGKDKEAAKA KAAALLRDFD LNLPASGVAG
201: DEAESPPPEA KRARLMLLAI
101: SYQALGGHKT SHRKPPTPPA ASAGGDEASG GAPVEAKVHQ CSLCHRTFPS GQALGGHKRL HYEGGAAGAG TGKDKEAAKA KAAALLRDFD LNLPASGVAG
201: DEAESPPPEA KRARLMLLAI
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.