Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G161800.1 | Wheat | nucleus | 93.95 | 97.12 |
| TraesCS7B01G065700.1 | Wheat | nucleus | 92.09 | 92.96 |
| Zm00001d047334_P001 | Maize | nucleus | 59.07 | 56.44 |
| EER92088 | Sorghum | nucleus | 59.53 | 54.24 |
| Zm00001d029586_P001 | Maize | nucleus | 58.14 | 53.65 |
| EER92087 | Sorghum | nucleus | 62.33 | 52.34 |
| Zm00001d029587_P001 | Maize | nucleus | 58.6 | 50.81 |
| Os03t0437200-01 | Rice | cytosol, nucleus, vacuole | 51.63 | 50.45 |
| Zm00001d029589_P001 | Maize | nucleus | 47.91 | 49.05 |
| TraesCS2A01G090200.1 | Wheat | nucleus | 42.33 | 46.43 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 35.81 | 37.75 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 35.81 | 31.95 |
| TraesCS2A01G193900.1 | Wheat | nucleus | 29.77 | 29.09 |
| TraesCS5A01G401200.1 | Wheat | nucleus | 34.88 | 22.73 |
| CDY70162 | Canola | nucleus | 18.6 | 18.69 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 24.65 | 18.03 |
| Bra029315.1-P | Field mustard | nucleus | 18.6 | 17.17 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 24.65 | 16.88 |
| CDY42873 | Canola | nucleus | 19.53 | 16.87 |
| Bra012953.1-P | Field mustard | plastid | 20.0 | 15.64 |
| CDY02142 | Canola | nucleus | 19.53 | 15.44 |
| CDY23066 | Canola | plastid | 19.53 | 15.27 |
| TraesCS1A01G211800.1 | Wheat | nucleus | 22.33 | 14.37 |
| AT5G61470.1 | Thale cress | nucleus | 20.0 | 14.14 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G160700.2 | EnsemblPlantsGene:TraesCS7A01G160700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0009414 | GO:GO:0009628 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF178 | PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr7A:-:116774309..116774956
Molecular Weight (calculated)
22234.5 Da
IEP (calculated)
8.498
GRAVY (calculated)
-0.044
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAAMQALF DQTDLSLSLS LVPAAAPALN KDDYLAICLA ALAKSGQQVQ GMEGQARVWR PAPAPAQELR FSCAVCGKAF ASYQALGGHK SSHRKPPPTG
101: ERCVVVAQAS AGAGSEASAA ASSGGSSGGP HQCTVCGRGF ATGQALGGHK RCHYWDGTSV SMSVSVSVSA SSSVLRNFDL NLLPMPENVN AGLKRWAEEE
201: EVQSPLPAKK LRLLL
101: ERCVVVAQAS AGAGSEASAA ASSGGSSGGP HQCTVCGRGF ATGQALGGHK RCHYWDGTSV SMSVSVSVSA SSSVLRNFDL NLLPMPENVN AGLKRWAEEE
201: EVQSPLPAKK LRLLL
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.