Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G410300.1 | Wheat | nucleus | 93.2 | 89.25 |
| TraesCS2B01G431800.1 | Wheat | nucleus | 88.78 | 84.47 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 84.35 | 84.35 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 54.42 | 73.39 |
| Zm00001d002731_P001 | Maize | nucleus | 68.71 | 65.8 |
| EES11238 | Sorghum | mitochondrion | 73.81 | 65.17 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 63.95 | 59.87 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 31.97 | 48.21 |
| KRH57408 | Soybean | nucleus | 35.37 | 39.25 |
| KRH04135 | Soybean | nucleus | 34.69 | 38.78 |
| KRH28087 | Soybean | nucleus | 36.39 | 37.15 |
| TraesCS1A01G211800.1 | Wheat | nucleus | 42.18 | 37.13 |
| KRH77360 | Soybean | nucleus | 36.73 | 36.24 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 28.23 | 36.09 |
| CDY09671 | Canola | nucleus | 23.81 | 35.0 |
| CDY40527 | Canola | nucleus | 22.45 | 34.02 |
| CDY32274 | Canola | nucleus | 22.79 | 34.01 |
| AT4G16610.1 | Thale cress | nucleus | 23.47 | 33.82 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 36.73 | 33.44 |
| Bra040741.1-P | Field mustard | nucleus | 23.47 | 33.01 |
| CDY53641 | Canola | nucleus | 23.47 | 33.01 |
| CDY50848 | Canola | nucleus | 23.47 | 33.01 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 23.81 | 32.71 |
| CDY69391 | Canola | nucleus | 23.81 | 32.71 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 28.57 | 31.58 |
| Solyc06g060740.1.1 | Tomato | nucleus | 31.29 | 30.07 |
| PGSC0003DMT400030986 | Potato | nucleus | 30.95 | 29.84 |
| KRH39952 | Soybean | nucleus | 30.61 | 29.41 |
| PGSC0003DMT400012154 | Potato | nucleus | 28.91 | 28.52 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 19.73 | 28.43 |
| Solyc08g078590.1.1 | Tomato | nucleus | 26.19 | 27.4 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 21.43 | 26.14 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 32.65 | 26.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.73 | 25.44 |
| TraesCS7A01G160700.2 | Wheat | nucleus | 18.03 | 24.65 |
| TraesCS2A01G193900.1 | Wheat | nucleus | 18.03 | 24.09 |
| TraesCS2A01G090200.1 | Wheat | nucleus | 14.63 | 21.94 |
| Bra038491.1-P | Field mustard | nucleus | 22.11 | 16.71 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 20.41 | 16.62 |
| TraesCS5A01G401200.1 | Wheat | nucleus | 18.37 | 16.36 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G413100.1 | EnsemblPlantsGene:TraesCS2A01G413100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF323 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr2A:-:670314058..670315235
Molecular Weight (calculated)
31045.6 Da
IEP (calculated)
8.883
GRAVY (calculated)
-0.534
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNTCKLCS RRFASPRALA GHMRSHSVKV ARPQQISSAS SASTSVAAAD DDARMAIQAH VLRGKPKRRA RLAESDFSDR ESEAEYPSQS PGAKRVHAGS
101: RDAEPVSSVS DAATPEEDVA RSLMMLSRDS WPAPPPSYRA ADSDDAEAAP APPAAEQKRT RFQCPACKKV FRSYQALGGH RASHVRGGRG GCCAPPLSPP
201: PASTHLQPLP ECEEGTKPPP HPHECPCCSR VFASGQALGG HKRPQLRPAA AAVAAHPAAA MKSLGLIDLN LPAPFEDVEL SAVSDPFLAA RPGH
101: RDAEPVSSVS DAATPEEDVA RSLMMLSRDS WPAPPPSYRA ADSDDAEAAP APPAAEQKRT RFQCPACKKV FRSYQALGGH RASHVRGGRG GCCAPPLSPP
201: PASTHLQPLP ECEEGTKPPP HPHECPCCSR VFASGQALGG HKRPQLRPAA AAVAAHPAAA MKSLGLIDLN LPAPFEDVEL SAVSDPFLAA RPGH
001: MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
Arabidopsis Description
ZAT1Zinc finger protein ZAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q39092]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.