Factsheet for GSMUA_Achr7P04600_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	39.89	63.16
GSMUA_Achr1P24150_001	Banana	mitochondrion	28.53	38.72
GSMUA_AchrUn_...	Banana	mitochondrion	33.24	32.52
GSMUA_Achr4P12160_001	Banana	mitochondrion	16.07	29.74
GSMUA_Achr4P05560_001	Banana	nucleus	18.56	29.13
GSMUA_Achr4P26920_001	Banana	mitochondrion	18.84	24.91
CDY40527	Canola	nucleus	13.3	24.74
GSMUA_Achr5P15450_001	Banana	mitochondrion	18.84	24.55
KRH57408	Soybean	nucleus	18.01	24.53
CDY09671	Canola	nucleus	13.3	24.0
CDY32274	Canola	nucleus	13.02	23.86
KRH28087	Soybean	nucleus	18.84	23.61
AT4G16610.1	Thale cress	nucleus	13.3	23.53
GSMUA_Achr1P01550_001	Banana	nucleus	19.11	23.47
CDY50848	Canola	nucleus	13.57	23.45
CDY53641	Canola	nucleus	13.57	23.45
Bra040741.1-P	Field mustard	nucleus	13.57	23.45
GSMUA_Achr5P13370_001	Banana	mitochondrion, nucleus	19.11	23.31
KRH04135	Soybean	nucleus	16.9	23.19
CDY69391	Canola	nucleus	13.57	22.9
KRH77360	Soybean	nucleus	18.84	22.82
HORVU2Hr1G097440.1	Barley	mitochondrion	13.57	22.48
Bra012701.1-P	Field mustard	nucleus, plastid	13.3	22.43
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	14.13	22.17
GSMUA_Achr2P18480_001	Banana	nucleus	14.96	22.04
HORVU2Hr1G097410.1	Barley	nucleus	16.9	20.75
TraesCS2A01G413100.1	Wheat	nucleus	16.62	20.41
TraesCS2D01G410300.1	Wheat	nucleus	16.62	19.54
TraesCS6B01G276100.1	Wheat	nucleus	16.9	19.43
TraesCS2B01G431800.1	Wheat	nucleus	16.62	19.42
Zm00001d002731_P001	Maize	nucleus	16.34	19.22
HORVU6Hr1G063280.1	Barley	mitochondrion, nucleus, plastid	16.34	18.85
HORVU0Hr1G030680.1	Barley	nucleus	16.34	18.85
TraesCS6A01G248700.1	Wheat	nucleus	16.34	18.79
TraesCS6D01G230800.1	Wheat	nucleus	16.34	18.73
PGSC0003DMT400030986	Potato	nucleus	15.79	18.69
Solyc06g060740.1.1	Tomato	nucleus	15.51	18.3
VIT_00s0229g00050.t01	Wine grape	nucleus	16.07	17.96
GSMUA_Achr6P34890_001	Banana	nucleus, plastid	13.3	17.71
Os02t0659500-01	Rice	mitochondrion	16.34	17.3
EES11238	Sorghum	mitochondrion	15.79	17.12
Zm00001d017497_P001	Maize	mitochondrion	14.68	16.77
Solyc08g078590.1.1	Tomato	nucleus	12.74	16.37
OQU85696	Sorghum	mitochondrion	14.96	16.02
GSMUA_Achr4P03310_001	Banana	nucleus	11.36	15.89
PGSC0003DMT400012154	Potato	nucleus	13.02	15.77
KRH39952	Soybean	nucleus	13.02	15.36
Zm00001d051371_P001	Maize	mitochondrion	13.85	14.75
Bra038491.1-P	Field mustard	nucleus	15.51	14.4
GSMUA_Achr4P32760_001	Banana	nucleus	12.19	13.46
GSMUA_Achr9P09370_001	Banana	nucleus	10.25	13.41
GSMUA_Achr4P28230_001	Banana	nucleus	6.37	10.75
GSMUA_Achr9P26580_001	Banana	nucleus	5.54	9.57
GSMUA_Achr2P13410_001	Banana	nucleus	6.37	9.47
GSMUA_Achr5P08730_001	Banana	nucleus	6.09	8.91
GSMUA_Achr5P01720_001	Banana	nucleus	5.54	8.77
GSMUA_Achr6P24730_001	Banana	nucleus	6.37	8.33

Protein Annotations

EnsemblPlants:GSMUA_Achr7P04600_001	EnsemblPlants:GSMUA_Achr7T04600_001	EnsemblPlantsGene:GSMUA_Achr7G04600_001	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF185	PFAM:PF13912	PFscan:PS50157
ScanProsite:PS00028	SEG:seg	UniParc:UPI000296D0D9	UniProt:M0TEQ0	MapMan:35.2	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G04600_001]

Coordinates

chr7:-:3469622..3470882

Molecular Weight (calculated)

39627.7 Da

IEP (calculated)

12.062

GRAVY (calculated)

-0.695

Length

361 amino acids

Sequence
(BLAST)

001: MDRPRCRLCG RRFSNGHALG GHMRSHRNSA ARPAMAQQAL PSPSASSSSF SFSSVAAGGS STVVHEGESD AESSFRRRLS RPRRQVDAVA DAKPVSSVSD
101: ASTEEDVARC LMLLSRDAWR RNRNRHSPPD RGGRGRGTNA ARAGSSSGRI KLSAATARAT RGSRWNASRP PIPTLLTASP SSSSALTAAG SSPPARRSAA
201: TKDPIFPPPS LPPFTVRYRR SLLSSSKAAS STSTSQPHPK KRQRSRRSPS QRNSRQSNRF SLLRLLSELK VAILEVIQGK FFRFQKKRQI ESDSYAFHCF
301: QASSIWVTSC SGHCNYSTAE KNHMNQKGKR RRNSEIFFVE LFVLESCRSK ASLSEKLALC Y

Best Arabidopsis Sequence Match ( AT3G60580.1 )
(BLAST)

001: MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ

Arabidopsis Description

ZAT9Zinc finger protein ZAT9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M202]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.