Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P13410_001 | Banana | nucleus | 64.59 | 55.56 |
| GSMUA_Achr4P28230_001 | Banana | nucleus | 55.02 | 53.74 |
| GSMUA_Achr5P01720_001 | Banana | nucleus | 58.37 | 53.51 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 42.58 | 36.03 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 35.41 | 26.81 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 22.97 | 20.87 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 25.84 | 19.49 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 24.88 | 19.05 |
| GSMUA_Achr5P13370_001 | Banana | mitochondrion, nucleus | 26.32 | 18.58 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 16.75 | 17.95 |
| GSMUA_Achr2P18480_001 | Banana | nucleus | 19.62 | 16.73 |
| GSMUA_Achr1P01550_001 | Banana | nucleus | 22.97 | 16.33 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 16.27 | 14.78 |
| GSMUA_Achr6P34890_001 | Banana | nucleus, plastid | 18.66 | 14.39 |
| GSMUA_Achr4P03310_001 | Banana | nucleus | 17.22 | 13.95 |
| GSMUA_Achr9P09370_001 | Banana | nucleus | 17.22 | 13.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 22.97 | 13.01 |
| GSMUA_Achr4P32760_001 | Banana | nucleus | 20.1 | 12.84 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 13.88 | 10.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 8.13 | 7.46 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 9.57 | 5.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P26580_001 | EnsemblPlants:GSMUA_Achr9T26580_001 | EnsemblPlantsGene:GSMUA_Achr9G26580_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI00029534BF | UniProt:M0U3R5 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Putative ZOS12-09 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G26580_001]
Coordinates
chr9:+:30971150..30972088
Molecular Weight (calculated)
21655.6 Da
IEP (calculated)
8.242
GRAVY (calculated)
-0.272
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDTVETAV ALVPPQPPPR SEMSEDELPP VEGWAKRKRS KRHHRFFDHP PTEEEYLALC LMMLARGGSG HHLPSVSTAS AAATPTPTAK VGFKCSVCGK
101: AFGSYQALGG HKASHRKLNA SSGGEEPSAA ASPAASASGS STAAAGATTT GGKVHQCSGA SSSRKGFDLN LPATAEFALD VSRLCVAMAE EEEVQSPMAF
201: KKARLLIPA
101: AFGSYQALGG HKASHRKLNA SSGGEEPSAA ASPAASASGS STAAAGATTT GGKVHQCSGA SSSRKGFDLN LPATAEFALD VSRLCVAMAE EEEVQSPMAF
201: KKARLLIPA
001: MALDTLNSPT STTTTTAPPP FLRCLDETEP ENLESWTKRK RTKRHRIDQP NPPPSEEEYL ALCLLMLARG SSDHHSPPSD HHSLSPLSDH QKDYKCSVCG
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
Arabidopsis Description
At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.