Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P28230_001 | Banana | nucleus | 69.55 | 78.97 |
| GSMUA_Achr5P01720_001 | Banana | nucleus | 66.67 | 71.05 |
| GSMUA_Achr9P26580_001 | Banana | nucleus | 55.56 | 64.59 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 42.39 | 41.7 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 37.04 | 32.61 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 23.87 | 25.22 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 25.93 | 22.74 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 18.11 | 22.56 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 25.1 | 22.34 |
| GSMUA_Achr2P18480_001 | Banana | nucleus | 21.81 | 21.63 |
| GSMUA_Achr4P03310_001 | Banana | nucleus | 20.99 | 19.77 |
| GSMUA_Achr5P13370_001 | Banana | mitochondrion, nucleus | 23.87 | 19.59 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 18.11 | 19.13 |
| GSMUA_Achr1P01550_001 | Banana | nucleus | 22.63 | 18.71 |
| GSMUA_Achr6P34890_001 | Banana | nucleus, plastid | 18.52 | 16.61 |
| GSMUA_Achr4P32760_001 | Banana | nucleus | 22.22 | 16.51 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 24.28 | 15.99 |
| GSMUA_Achr9P09370_001 | Banana | nucleus | 18.11 | 15.94 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 16.05 | 14.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 7.41 | 7.89 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 9.47 | 6.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P13410_001 | EnsemblPlants:GSMUA_Achr2T13410_001 | EnsemblPlantsGene:GSMUA_Achr2G13410_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000294DC09 | UniProt:M0S7N2 | MapMan:15.5.15 | : | : | : |
Description
Putative Zinc finger protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13410_001]
Coordinates
chr2:+:15558515..15559420
Molecular Weight (calculated)
25279.6 Da
IEP (calculated)
7.893
GRAVY (calculated)
-0.355
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIEAVEIRT TASIPPPSAE MSDEELPHIE GWAKRKRSKR HRFFDHPPTE EEYLALCLVM LARDGSGHRP PSLTSDSEAA PPPAKFQYKC SVCGKAFGSY
101: QALGGHKTSH RKPTGGADEA SVASTAASAS GSSTAGAASG GGRLHQCSVC LKTFPSGQAL GGHKRRHYEG SLGSSAAAVA PATSEGASSS HRGLDLTVAA
201: LPEFEFDGVR RCLAAAAAAT AAAEDEEVQS PLAFKKPRLL IPT
101: QALGGHKTSH RKPTGGADEA SVASTAASAS GSSTAGAASG GGRLHQCSVC LKTFPSGQAL GGHKRRHYEG SLGSSAAAVA PATSEGASSS HRGLDLTVAA
201: LPEFEFDGVR RCLAAAAAAT AAAEDEEVQS PLAFKKPRLL IPT
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.