Factsheet for GSMUA_Achr5P13370_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P15450_001	Banana	mitochondrion	61.82	66.06
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	46.96	60.43
GSMUA_Achr4P26920_001	Banana	mitochondrion	55.41	60.07
GSMUA_Achr1P01550_001	Banana	nucleus	57.77	58.16
GSMUA_Achr4P12160_001	Banana	mitochondrion	31.42	47.69
GSMUA_Achr2P18480_001	Banana	nucleus	37.84	45.71
KRH04135	Soybean	nucleus	38.51	43.35
KRH57408	Soybean	nucleus	37.5	41.89
KRH28087	Soybean	nucleus	36.49	37.5
KRH77360	Soybean	nucleus	36.15	35.91
VIT_00s0229g00050.t01	Wine grape	nucleus	37.16	34.06
CDY09671	Canola	nucleus	22.97	34.0
GSMUA_Achr1P24150_001	Banana	mitochondrion	30.41	33.83
CDY40527	Canola	nucleus	21.96	33.51
GSMUA_Achr4P05560_001	Banana	nucleus	26.01	33.48
PGSC0003DMT400030986	Potato	nucleus	34.46	33.44
CDY50848	Canola	nucleus	23.31	33.01
Solyc06g060740.1.1	Tomato	nucleus	34.12	33.01
CDY32274	Canola	nucleus	21.96	32.99
AT4G16610.1	Thale cress	nucleus	22.64	32.84
PGSC0003DMT400012154	Potato	nucleus	32.77	32.55
CDY53641	Canola	nucleus	22.97	32.54
Bra040741.1-P	Field mustard	nucleus	22.97	32.54
CDY69391	Canola	nucleus	23.31	32.24
Bra012701.1-P	Field mustard	nucleus, plastid	22.97	31.78
GSMUA_Achr9P09370_001	Banana	nucleus	29.05	31.16
Solyc08g078590.1.1	Tomato	nucleus	29.39	30.96
GSMUA_Achr6P34890_001	Banana	nucleus, plastid	28.04	30.63
GSMUA_Achr4P03310_001	Banana	nucleus	26.35	30.23
KRH39952	Soybean	nucleus	31.08	30.07
GSMUA_Achr4P32760_001	Banana	nucleus	31.76	28.75
GSMUA_AchrUn_...	Banana	mitochondrion	35.47	28.46
GSMUA_AchrUn_...	Banana	nucleus	21.28	27.63
GSMUA_Achr4P28230_001	Banana	nucleus	19.93	27.57
GSMUA_Achr9P26580_001	Banana	nucleus	18.58	26.32
GSMUA_Achr5P01720_001	Banana	nucleus	19.59	25.44
GSMUA_Achr5P08730_001	Banana	nucleus	20.27	24.29
GSMUA_Achr2P13410_001	Banana	nucleus	19.59	23.87
GSMUA_Achr6P24730_001	Banana	nucleus	18.92	20.29
GSMUA_Achr7P04600_001	Banana	nucleus	23.31	19.11
Bra038491.1-P	Field mustard	nucleus	22.97	17.48

Protein Annotations

EnsemblPlants:GSMUA_Achr5P13370_001	EnsemblPlants:GSMUA_Achr5T13370_001	EnsemblPlantsGene:GSMUA_Achr5G13370_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF304
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000296BFB9	UniProt:M0SY66	MapMan:15.5.15	:	:	:

Description

Putative ZOS10-07 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G13370_001]

Coordinates

chr5:-:9589571..9590632

Molecular Weight (calculated)

32094.2 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.756

Length

296 amino acids

Sequence
(BLAST)

001: MDRHTCNLCF RRFSNGRALG GHMRSHFIAA APLARPRSHG YSSDSTSSAQ RAAERAFSSS TFAAVEAAGS CDVVQDGESE TESPRGQRLP TKRPCRATAP
101: PLDQPEGEPM SSVSDATPEE DIALCLMMLS RDSWTATVED RPLDGSDDED TRRPAARSRP PPRKGRSRYQ CSACKKVFRS YQALGGHRAS HKRTNGCRPV
201: TEPRINSEAD SVDANADAKV HECPLCFRVF SSGQALGSHK RSHLTTSPVP ATTKHGGNFG LIDLNLPAPE EDDAELSAVE STQSVPTQPA RRKHAI

Best Arabidopsis Sequence Match ( AT2G45120.1 )
(BLAST)

001: MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS QLCDDDDDTE SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR
101: INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG
201: KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA
301: PNEEDETSLV FDEW

Arabidopsis Description

ZAT4Zinc finger protein ZAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.