Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 59.18 | 63.74 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 55.44 | 58.84 |
| GSMUA_Achr5P13370_001 | Banana | mitochondrion, nucleus | 58.16 | 57.77 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 42.18 | 53.91 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 31.97 | 48.21 |
| GSMUA_Achr2P18480_001 | Banana | nucleus | 40.14 | 48.16 |
| KRH57408 | Soybean | nucleus | 37.07 | 41.13 |
| KRH04135 | Soybean | nucleus | 36.73 | 41.06 |
| KRH28087 | Soybean | nucleus | 37.07 | 37.85 |
| KRH77360 | Soybean | nucleus | 37.41 | 36.91 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 31.63 | 34.96 |
| CDY40527 | Canola | nucleus | 22.45 | 34.02 |
| CDY32274 | Canola | nucleus | 22.79 | 34.01 |
| CDY09671 | Canola | nucleus | 23.13 | 34.0 |
| AT4G16610.1 | Thale cress | nucleus | 23.47 | 33.82 |
| PGSC0003DMT400030986 | Potato | nucleus | 34.35 | 33.11 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 25.85 | 33.04 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 36.05 | 32.82 |
| Solyc06g060740.1.1 | Tomato | nucleus | 34.01 | 32.68 |
| CDY53641 | Canola | nucleus | 22.79 | 32.06 |
| CDY50848 | Canola | nucleus | 22.79 | 32.06 |
| Bra040741.1-P | Field mustard | nucleus | 22.79 | 32.06 |
| CDY69391 | Canola | nucleus | 22.79 | 31.31 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 22.45 | 30.84 |
| GSMUA_Achr4P03310_001 | Banana | nucleus | 26.87 | 30.62 |
| GSMUA_Achr6P34890_001 | Banana | nucleus, plastid | 27.89 | 30.26 |
| Solyc08g078590.1.1 | Tomato | nucleus | 28.91 | 30.25 |
| PGSC0003DMT400012154 | Potato | nucleus | 30.61 | 30.2 |
| KRH39952 | Soybean | nucleus | 30.27 | 29.09 |
| GSMUA_Achr9P09370_001 | Banana | nucleus | 27.21 | 28.99 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 36.05 | 28.73 |
| GSMUA_Achr4P32760_001 | Banana | nucleus | 31.29 | 28.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.43 | 27.63 |
| GSMUA_Achr4P28230_001 | Banana | nucleus | 18.71 | 25.7 |
| GSMUA_Achr5P01720_001 | Banana | nucleus | 19.73 | 25.44 |
| GSMUA_Achr9P26580_001 | Banana | nucleus | 16.33 | 22.97 |
| GSMUA_Achr2P13410_001 | Banana | nucleus | 18.71 | 22.63 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 18.37 | 21.86 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 23.47 | 19.11 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 17.35 | 18.48 |
| Bra038491.1-P | Field mustard | nucleus | 22.79 | 17.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P01550_001 | EnsemblPlants:GSMUA_Achr1T01550_001 | EnsemblPlantsGene:GSMUA_Achr1G01550_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF304 |
| PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0002965383 | UniProt:M0RW63 | MapMan:15.5.15 | : | : | : |
Description
Putative ZOS10-07 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G01550_001]
Coordinates
chr1:-:1227703..1228665
Molecular Weight (calculated)
32040.7 Da
IEP (calculated)
9.613
GRAVY (calculated)
-0.530
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRTCNVCF RRFSDGYALG RHMRSHVTST APRSRSCRPG DSHSSVSSGH AASERDVEEE KAVEVGLSCG LRVNLRKNFR LVDSSETESP RARRLRTKKR
101: RLGATALSPD QPDAEPASSV SYATPDEDVA LCLMMLSRDS WAAARSRPPL RRGRSRHQCD ACKKVFRSYQ ALGGHRASHK RINGCVPAVE RRVASSADGV
201: DTNADARVYE CPFCFRVFSS GQALGGHKRS HFMSSVTNKS PSSTSPVPAV TNYVRSFGLI DLNLPAPAVD DLELSAISDT EVPFPTSTCG KHAI
101: RLGATALSPD QPDAEPASSV SYATPDEDVA LCLMMLSRDS WAAARSRPPL RRGRSRHQCD ACKKVFRSYQ ALGGHRASHK RINGCVPAVE RRVASSADGV
201: DTNADARVYE CPFCFRVFSS GQALGGHKRS HFMSSVTNKS PSSTSPVPAV TNYVRSFGLI DLNLPAPAVD DLELSAISDT EVPFPTSTCG KHAI
001: MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
Arabidopsis Description
ZAT9Zinc finger protein ZAT9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M202]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.