Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40527 | Canola | nucleus | 92.89 | 94.33 |
| CDY50848 | Canola | nucleus | 84.26 | 79.43 |
| CDY53641 | Canola | nucleus | 83.76 | 78.95 |
| AT4G16610.1 | Thale cress | nucleus | 77.67 | 75.0 |
| CDY69391 | Canola | nucleus | 81.22 | 74.77 |
| CDY09671 | Canola | nucleus | 75.63 | 74.5 |
| Bra038491.1-P | Field mustard | nucleus | 90.36 | 45.76 |
| KRH57408 | Soybean | nucleus | 44.16 | 32.83 |
| KRH04135 | Soybean | nucleus | 41.62 | 31.18 |
| KRH28087 | Soybean | nucleus | 42.13 | 28.82 |
| GSMUA_Achr2P18480_001 | Banana | nucleus | 35.53 | 28.57 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 38.58 | 27.84 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 45.18 | 27.55 |
| KRH77360 | Soybean | nucleus | 41.12 | 27.18 |
| CDX71799 | Canola | nucleus | 34.01 | 25.77 |
| CDY71582 | Canola | nucleus | 35.53 | 25.74 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 29.95 | 25.65 |
| CDX67836 | Canola | nucleus | 38.07 | 25.42 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 27.92 | 25.23 |
| CDX89061 | Canola | nucleus | 33.5 | 25.1 |
| CDY41155 | Canola | nucleus | 30.96 | 24.6 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 34.52 | 24.55 |
| PGSC0003DMT400030986 | Potato | nucleus | 37.56 | 24.26 |
| CDY37027 | Canola | nucleus | 34.52 | 24.2 |
| Solyc06g060740.1.1 | Tomato | nucleus | 37.56 | 24.18 |
| CDX95629 | Canola | nucleus | 33.5 | 24.09 |
| CDY27394 | Canola | nucleus | 34.52 | 23.86 |
| PGSC0003DMT400012154 | Potato | nucleus | 36.04 | 23.83 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 35.03 | 23.47 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 22.84 | 23.08 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 34.01 | 22.79 |
| GSMUA_Achr1P01550_001 | Banana | nucleus | 34.01 | 22.79 |
| HORVU0Hr1G030680.1 | Barley | nucleus | 36.04 | 22.68 |
| HORVU6Hr1G063280.1 | Barley | mitochondrion, nucleus, plastid | 36.04 | 22.68 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 36.04 | 22.61 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 36.04 | 22.61 |
| Solyc08g078590.1.1 | Tomato | nucleus | 31.98 | 22.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.89 | 22.37 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 35.53 | 22.22 |
| Zm00001d002731_P001 | Maize | nucleus | 34.52 | 22.15 |
| CDX83402 | Canola | nucleus | 33.5 | 22.15 |
| GSMUA_Achr5P13370_001 | Banana | mitochondrion, nucleus | 32.99 | 21.96 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 34.01 | 21.82 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 29.44 | 21.8 |
| TraesCS2B01G431800.1 | Wheat | nucleus | 34.01 | 21.68 |
| CDY48363 | Canola | nucleus | 30.96 | 21.25 |
| Os10t0555300-01 | Rice | mitochondrion, nucleus | 38.58 | 21.17 |
| OQU85696 | Sorghum | mitochondrion | 36.04 | 21.07 |
| EES11238 | Sorghum | mitochondrion | 35.53 | 21.02 |
| TraesCS1A01G211800.1 | Wheat | nucleus | 35.03 | 20.66 |
| Zm00001d017497_P001 | Maize | mitochondrion | 32.49 | 20.25 |
| CDY02102 | Canola | nucleus | 16.24 | 20.25 |
| TraesCS1B01G225500.1 | Wheat | nucleus | 34.52 | 19.94 |
| TraesCS1D01G214900.1 | Wheat | nucleus | 34.52 | 19.94 |
| HORVU1Hr1G054170.1 | Barley | nucleus | 34.52 | 19.83 |
| Zm00001d047102_P001 | Maize | nucleus | 34.01 | 19.71 |
| Zm00001d029917_P001 | Maize | nucleus | 33.5 | 19.35 |
| Zm00001d051371_P001 | Maize | mitochondrion | 32.99 | 19.17 |
| CDY23027 | Canola | nucleus | 16.24 | 18.82 |
| Os02t0659500-01 | Rice | mitochondrion | 32.49 | 18.77 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 21.32 | 18.26 |
| CDY22361 | Canola | nucleus | 16.75 | 17.84 |
| CDY30794 | Canola | nucleus | 16.75 | 17.46 |
| EER91950 | Sorghum | mitochondrion, plastid | 32.99 | 16.84 |
| CDX81313 | Canola | nucleus | 15.23 | 16.13 |
| CDY43576 | Canola | nucleus | 16.24 | 15.31 |
| CDY18661 | Canola | nucleus | 15.23 | 14.49 |
| CDY37851 | Canola | nucleus | 15.74 | 14.42 |
| CDY03945 | Canola | nucleus | 16.75 | 14.29 |
| CDX68559 | Canola | nucleus | 16.24 | 14.22 |
| CDX83103 | Canola | nucleus | 15.74 | 13.96 |
| CDX90105 | Canola | nucleus | 16.24 | 13.73 |
| CDY11770 | Canola | nucleus | 16.24 | 13.73 |
| CDY51312 | Canola | nucleus | 15.23 | 13.64 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 25.38 | 13.55 |
| CDX68558 | Canola | nucleus | 15.23 | 13.51 |
| CDY02142 | Canola | nucleus | 18.27 | 13.24 |
| CDX70236 | Canola | nucleus, plastid | 15.23 | 13.16 |
| CDX84907 | Canola | nucleus | 15.23 | 13.1 |
| CDY23066 | Canola | plastid | 18.27 | 13.09 |
| CDY65161 | Canola | nucleus | 17.77 | 13.06 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 23.86 | 13.02 |
| CDX82290 | Canola | nucleus | 17.77 | 13.01 |
| CDX99202 | Canola | nucleus | 17.26 | 12.78 |
| CDY46162 | Canola | nucleus | 17.26 | 12.73 |
| CDY27629 | Canola | nucleus | 14.72 | 12.66 |
| CDX95435 | Canola | nucleus | 16.75 | 12.64 |
| CDY42192 | Canola | nucleus | 16.75 | 12.5 |
| CDY08718 | Canola | nucleus | 15.23 | 12.45 |
| CDY36493 | Canola | nucleus | 15.23 | 12.45 |
| CDY42873 | Canola | nucleus | 13.71 | 10.84 |
| CDY70162 | Canola | nucleus | 8.63 | 7.94 |
| CDY50966 | Canola | nucleus | 13.71 | 7.24 |
| CDY28108 | Canola | nucleus | 14.21 | 6.21 |
Protein Annotations
| EnsemblPlants:CDY32274 | EnsemblPlantsGene:GSBRNA2T00051728001 | GO:A0A078H4E9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF185 | PFAM:PF13912 | PFscan:PS50157 |
| ProteinID:CDY32274 | ProteinID:CDY32274.1 | ScanProsite:PS00028 | SEG:seg | UniParc:UPI0004EF2422 | UniProt:A0A078H4E9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g17100DBnaA01g17100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4E9]
Coordinates
chrLK032290:-:438403..439304
Molecular Weight (calculated)
22239.7 Da
IEP (calculated)
10.302
GRAVY (calculated)
-0.816
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MHKHKCKLCS KSFCNGRALG GHMKSHLVSS HTLTRKKLSD SVYSSSSSSE GKTLVYGLRE NPRKSFRVFS QDPESSIVYN SDTETEPESV DPVRKRSRTA
101: VSKNKKKKKR SKKMTRYISS PEPASSVSDG SQEHDLAMCL MMLSRDSRKI ELVKKPVLEA EETKPEKRQF PELRRCVIDL NLPPPQENDV VTVVSAI
101: VSKNKKKKKR SKKMTRYISS PEPASSVSDG SQEHDLAMCL MMLSRDSRKI ELVKKPVLEA EETKPEKRQF PELRRCVIDL NLPPPQENDV VTVVSAI
001: MQNKHKCKLC SKSFCNGRAL GGHMKSHLVS SQSSARKKLG DSVYSSSSSS SDGKALAYGL RENPRKSFRV FNPDPESSTI YNSETETEPE SGDPVKKRVR
101: GDVSKKKKKK AKSKRVFENS KKQKTIHESP EPASSVSDGS PEQDLAMCLM MLSRDSRELE IKLKKPEEER KPEKRHFPEL RRCMIDLNLP PPQEAEAVTV
201: VSAI
101: GDVSKKKKKK AKSKRVFENS KKQKTIHESP EPASSVSDGS PEQDLAMCLM MLSRDSRELE IKLKKPEEER KPEKRHFPEL RRCMIDLNLP PPQEAEAVTV
201: VSAI
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:O23504]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.