Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G063280.1 | Barley | mitochondrion, nucleus, plastid | 99.36 | 99.36 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 93.93 | 93.33 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 93.61 | 93.31 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 93.29 | 92.99 |
| Os02t0659500-01 | Rice | mitochondrion | 73.8 | 67.74 |
| OQU85696 | Sorghum | mitochondrion | 70.29 | 65.28 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 58.79 | 62.59 |
| Zm00001d017497_P001 | Maize | mitochondrion | 61.98 | 61.39 |
| Zm00001d051371_P001 | Maize | mitochondrion | 64.86 | 59.88 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 38.02 | 54.59 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 31.31 | 50.26 |
| KRH57408 | Soybean | nucleus | 34.82 | 41.13 |
| KRH04135 | Soybean | nucleus | 33.23 | 39.54 |
| HORVU1Hr1G054170.1 | Barley | nucleus | 42.49 | 38.78 |
| KRH28087 | Soybean | nucleus | 34.19 | 37.15 |
| CDY09671 | Canola | nucleus | 23.64 | 37.0 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 27.16 | 36.96 |
| KRH77360 | Soybean | nucleus | 34.82 | 36.58 |
| AT4G16610.1 | Thale cress | nucleus | 23.64 | 36.27 |
| CDY40527 | Canola | nucleus | 22.36 | 36.08 |
| CDY32274 | Canola | nucleus | 22.68 | 36.04 |
| CDY53641 | Canola | nucleus | 23.96 | 35.89 |
| Bra040741.1-P | Field mustard | nucleus | 23.96 | 35.89 |
| CDY50848 | Canola | nucleus | 23.64 | 35.41 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 23.96 | 35.05 |
| CDY69391 | Canola | nucleus | 23.96 | 35.05 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 29.39 | 34.59 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 35.46 | 34.37 |
| PGSC0003DMT400030986 | Potato | nucleus | 31.95 | 32.79 |
| Solyc06g060740.1.1 | Tomato | nucleus | 31.95 | 32.68 |
| PGSC0003DMT400012154 | Potato | nucleus | 29.39 | 30.87 |
| KRH39952 | Soybean | nucleus | 30.03 | 30.72 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 20.45 | 29.22 |
| Solyc08g078590.1.1 | Tomato | nucleus | 26.2 | 29.18 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 31.95 | 27.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.53 | 25.44 |
| HORVU2Hr1G014870.1 | Barley | nucleus | 15.97 | 23.15 |
| Bra038491.1-P | Field mustard | nucleus | 24.28 | 19.54 |
| HORVU5Hr1G097500.3 | Barley | nucleus, plastid | 17.89 | 18.12 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 18.85 | 16.34 |
| HORVU3Hr1G028100.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.22 | 16.08 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G030680.1 | EnsemblPlantsGene:HORVU0Hr1G030680 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF260 | PFAM:PF13894 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000B47B156 |
| UniProt:A0A287EA73 | MapMan:15.5.15 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:178703637..178705019
Molecular Weight (calculated)
33131.8 Da
IEP (calculated)
7.727
GRAVY (calculated)
-0.508
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNTCKLCF RRFASPRALA GHMRSHSVRN LAAKQQISSA SSASTSFTAA ADDDISFKKP LPIYALRENP KRSLRVTDVA FSDRESEAES TPPRAKRAHP
101: TAAGGETEPL SSVSDAATPE EDVALSLMML SRDSWPSSVG RGDGDYSDDG SDGGYTLPAP DPTPVEKRTR FQCGACKKVF RSYQALGGHR ASHVRGGRGG
201: CCAPPVAPPP TTPQPLPPLP LMERDGDEDM DGKGSPRECP YCYRVFPSGQ ALGGHKRSHV CSAAAAAAQA HAAAAPPDPI KAFGMIDLNI ALPFEDVELS
301: AVSDPRFSSN PAP
101: TAAGGETEPL SSVSDAATPE EDVALSLMML SRDSWPSSVG RGDGDYSDDG SDGGYTLPAP DPTPVEKRTR FQCGACKKVF RSYQALGGHR ASHVRGGRGG
201: CCAPPVAPPP TTPQPLPPLP LMERDGDEDM DGKGSPRECP YCYRVFPSGQ ALGGHKRSHV CSAAAAAAQA HAAAAPPDPI KAFGMIDLNI ALPFEDVELS
301: AVSDPRFSSN PAP
001: MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
Arabidopsis Description
ZAT1Zinc finger protein ZAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q39092]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.