Factsheet for GSMUA_Achr1P24150_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	37.97	44.3
GSMUA_Achr4P12160_001	Banana	mitochondrion	31.2	42.56
GSMUA_AchrUn_...	Banana	mitochondrion	53.38	38.48
GSMUA_Achr4P05560_001	Banana	nucleus	31.2	36.09
GSMUA_Achr4P26920_001	Banana	mitochondrion	36.84	35.9
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	30.08	34.78
KRH57408	Soybean	nucleus	34.21	34.34
GSMUA_Achr2P18480_001	Banana	nucleus	31.2	33.88
KRH04135	Soybean	nucleus	32.71	33.08
KRH28087	Soybean	nucleus	35.71	32.99
GSMUA_Achr5P15450_001	Banana	mitochondrion	33.46	32.13
GSMUA_Achr1P01550_001	Banana	nucleus	34.96	31.63
KRH77360	Soybean	nucleus	35.34	31.54
CDY40527	Canola	nucleus	22.56	30.93
GSMUA_Achr5P13370_001	Banana	mitochondrion, nucleus	33.83	30.41
VIT_00s0229g00050.t01	Wine grape	nucleus	36.09	29.72
CDY09671	Canola	nucleus	22.18	29.5
CDY32274	Canola	nucleus	21.8	29.44
HORVU6Hr1G063280.1	Barley	mitochondrion, nucleus, plastid	34.59	29.39
HORVU0Hr1G030680.1	Barley	nucleus	34.59	29.39
HORVU2Hr1G097410.1	Barley	nucleus	32.33	29.25
CDY53641	Canola	nucleus	22.93	29.19
Bra040741.1-P	Field mustard	nucleus	22.93	29.19
TraesCS6A01G248700.1	Wheat	nucleus	34.21	28.98
AT4G16610.1	Thale cress	nucleus	22.18	28.92
PGSC0003DMT400030986	Potato	nucleus	33.08	28.85
Solyc06g060740.1.1	Tomato	nucleus	33.08	28.76
Zm00001d002731_P001	Maize	nucleus	33.08	28.66
TraesCS6B01G276100.1	Wheat	nucleus	33.83	28.66
TraesCS6D01G230800.1	Wheat	nucleus	33.83	28.57
TraesCS2A01G413100.1	Wheat	nucleus	31.58	28.57
GSMUA_Achr7P04600_001	Banana	nucleus	38.72	28.53
CDY50848	Canola	nucleus	22.18	28.23
TraesCS2B01G431800.1	Wheat	nucleus	32.71	28.16
TraesCS2D01G410300.1	Wheat	nucleus	31.95	27.69
CDY69391	Canola	nucleus	22.18	27.57
Bra012701.1-P	Field mustard	nucleus, plastid	21.8	27.1
EES11238	Sorghum	mitochondrion	33.83	27.03
KRH39952	Soybean	nucleus	30.45	26.47
PGSC0003DMT400012154	Potato	nucleus	29.32	26.17
OQU85696	Sorghum	mitochondrion	33.08	26.11
Solyc08g078590.1.1	Tomato	nucleus	27.44	25.98
GSMUA_Achr6P34890_001	Banana	nucleus, plastid	26.32	25.83
Os02t0659500-01	Rice	mitochondrion	32.33	25.22
GSMUA_Achr4P03310_001	Banana	nucleus	24.06	24.81
HORVU2Hr1G097440.1	Barley	mitochondrion	18.8	22.94
GSMUA_Achr4P32760_001	Banana	nucleus	28.2	22.94
Zm00001d017497_P001	Maize	mitochondrion	26.32	22.15
Zm00001d051371_P001	Maize	mitochondrion	28.2	22.12
GSMUA_Achr9P09370_001	Banana	nucleus	22.93	22.1
GSMUA_Achr4P28230_001	Banana	nucleus	15.04	18.69
GSMUA_Achr5P01720_001	Banana	nucleus	15.04	17.54
GSMUA_Achr2P13410_001	Banana	nucleus	14.66	16.05
Bra038491.1-P	Field mustard	nucleus	22.56	15.42
GSMUA_Achr5P08730_001	Banana	nucleus	13.91	14.98
GSMUA_Achr9P26580_001	Banana	nucleus	10.9	13.88
GSMUA_Achr6P24730_001	Banana	nucleus	14.29	13.77

Protein Annotations

EnsemblPlants:GSMUA_Achr1P24150_001	EnsemblPlants:GSMUA_Achr1T24150_001	EnsemblPlantsGene:GSMUA_Achr1G24150_001	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF185	PFAM:PF13912
PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0002969765
UniProt:M0S2M2	MapMan:15.5.15	:	:	:	:

Description

Putative ZOS10-07 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G24150_001]

Coordinates

chr1:+:18555556..18557856

Molecular Weight (calculated)

29917.9 Da

IEP (calculated)

8.495

GRAVY (calculated)

-0.774

Length

266 amino acids

Sequence
(BLAST)

001: MERHRCKLCH RRFSNGRALG GHMRSHVAHV PRPTRAQQPL PSPCASSSFF PAEEAKDPEA AASYGPRENL RRSLSLVDHK FAFSSSFRRR FSRNRRREDP
101: SADAEPVSSI SDASPEEDVA RWLMLLSRNA WSKSEEEEDE EAKQPTATAR SWRKRTRYHD DPSDANAADR NPKLFECPYC YRVFPSGQAL GGHKRSHRLS
201: TAAIAAAIPA RPLLPVKDCF IDLNLPAPLE EEAELSALSV ATEFASNNES PLSCVIMNYT VRNQKD

Best Arabidopsis Sequence Match ( AT1G26610.1 )
(BLAST)

001: MEQFKERKFV CKFCSKRFPC GKSLGGHIRT HMNENSADSD EDEADKLKMI DENGGQSSYG LRENPKKNKR FVDHRQIMAL KQQQQQQQLQ ELRRCRECGK
101: GFVSSKALCG HMACHSEREK IVMDSQSDTE ASSSPIRRRS KRVVVKPHHK AAFVVGGNGI MNQSISASSD ASEIEPEQEE MARSLMMLSR DSSFKKGHNS
201: LAESSDNNSV ILETKSSSGE QVKMFNVKNV EELCKKNKLV VDNQMRSGEE NGDVHYDSDN SDSGYFRNGP KKLDSDVSVD GFFRNKTIMG SGSGFNSSPT
301: KQDRDMNRFR KEWYKEGGSG SGSGSGRSST KYDLRKSKRG FPSHGRKKIK YEFTESVYDS GEHSLETDSC ADTNRTIKIH SKSPMVKKAN GAKKKSKGHE
401: CPICFRVFKS GQALGGHKRS HFIGNQEHRT LVIQHQVAHE MHTLIDLNLP APIDE

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9FZE5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.