CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04135	Soybean	nucleus	83.02	83.65
KRH28087	Soybean	nucleus	66.04	60.76
KRH77360	Soybean	nucleus	66.79	59.4
CDY09671	Canola	nucleus	34.34	45.5
CDY40527	Canola	nucleus	32.83	44.85
CDY50848	Canola	nucleus	35.09	44.5
CDY32274	Canola	nucleus	32.83	44.16
Bra040741.1-P	Field mustard	nucleus	34.72	44.02
CDY53641	Canola	nucleus	34.72	44.02
GSMUA_Achr4P26920_001	Banana	mitochondrion	45.28	43.96
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	38.11	43.91
VIT_00s0229g00050.t01	Wine grape	nucleus	53.21	43.65
AT4G16610.1	Thale cress	nucleus	33.21	43.14
GSMUA_Achr2P18480_001	Banana	nucleus	39.62	42.86
CDY69391	Canola	nucleus	34.34	42.52
Bra012701.1-P	Field mustard	nucleus, plastid	33.96	42.06
GSMUA_Achr4P12160_001	Banana	mitochondrion	30.57	41.54
GSMUA_Achr5P15450_001	Banana	mitochondrion	43.02	41.16
PGSC0003DMT400030986	Potato	nucleus	46.79	40.66
PGSC0003DMT400012154	Potato	nucleus	45.28	40.27
Solyc06g060740.1.1	Tomato	nucleus	46.42	40.2
Solyc08g078590.1.1	Tomato	nucleus	41.89	39.5
KRH76140	Soybean	nucleus	51.7	37.53
GSMUA_Achr5P13370_001	Banana	mitochondrion, nucleus	41.89	37.5
GSMUA_Achr1P01550_001	Banana	nucleus	41.13	37.07
TraesCS2A01G413100.1	Wheat	nucleus	39.25	35.37
Zm00001d002731_P001	Maize	nucleus	40.75	35.18
HORVU6Hr1G063280.1	Barley	mitochondrion, nucleus, plastid	41.51	35.14
TraesCS6B01G276100.1	Wheat	nucleus	41.51	35.03
TraesCS6A01G248700.1	Wheat	nucleus	41.51	35.03
HORVU0Hr1G030680.1	Barley	nucleus	41.13	34.82
KRH65408	Soybean	nucleus	50.94	34.79
TraesCS6D01G230800.1	Wheat	nucleus	41.13	34.6
KRH75355	Soybean	nucleus	50.57	34.45
TraesCS1A01G211800.1	Wheat	nucleus	43.4	34.43
HORVU2Hr1G097410.1	Barley	nucleus	38.11	34.35
GSMUA_Achr1P24150_001	Banana	mitochondrion	34.34	34.21
Zm00001d047102_P001	Maize	nucleus	43.77	34.12
TraesCS1B01G225500.1	Wheat	nucleus	43.4	33.72
TraesCS2D01G410300.1	Wheat	nucleus	38.87	33.55
GSMUA_Achr4P05560_001	Banana	nucleus	29.06	33.48
TraesCS1D01G214900.1	Wheat	nucleus	43.02	33.43
TraesCS2B01G431800.1	Wheat	nucleus	38.87	33.33
HORVU1Hr1G054170.1	Barley	nucleus	43.02	33.24
Zm00001d029917_P001	Maize	nucleus	41.89	32.55
EES11238	Sorghum	mitochondrion	40.38	32.13
OQU85696	Sorghum	mitochondrion	40.38	31.75
Os10t0555300-01	Rice	mitochondrion, nucleus	42.26	31.2
Os02t0659500-01	Rice	mitochondrion	39.25	30.5
HORVU2Hr1G097440.1	Barley	mitochondrion	24.91	30.28
KRH39952	Soybean	nucleus	34.72	30.07
EER91950	Sorghum	mitochondrion, plastid	42.64	29.27
Zm00001d051371_P001	Maize	mitochondrion	37.36	29.2
Zm00001d017497_P001	Maize	mitochondrion	33.58	28.16
GSMUA_AchrUn_...	Banana	nucleus	24.15	28.07
KRH52082	Soybean	nucleus	21.89	24.89
GSMUA_AchrUn_...	Banana	mitochondrion	33.96	24.39
KRH61394	Soybean	nucleus	21.13	24.03
KRH05601	Soybean	nucleus	21.51	23.75
KRH15443	Soybean	nucleus	20.75	23.61
Bra038491.1-P	Field mustard	nucleus	32.08	21.85
KRG91102	Soybean	nucleus	21.13	21.54
KRH35675	Soybean	nucleus	20.38	21.01
GSMUA_Achr7P04600_001	Banana	nucleus	24.53	18.01

Protein Annotations

EntrezGene:100806512	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02002832	EnsemblPlantsGene:GLYMA_05G059800	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
UniProt:I1K0Q6	InterPro:IPR013087	EnsemblPlants:KRH57408	ProteinID:KRH57408	ProteinID:KRH57408.1	PFAM:PF13912
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF185	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI0002339A08	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:5575407..5576204

Molecular Weight (calculated)

29737.7 Da

IEP (calculated)

9.190

GRAVY (calculated)

-1.054

Length

265 amino acids

Sequence
(BLAST)

001: MDRHKCKLCS RSFSNGRALG GHMKAHLATL PLPPKPHSYS SSSDSEQEQE QESLNYALRE NPKKSFRVAD PEDRESETES RNPTRQRSKR NRKSTMPKLT
101: PPPHPEPEPL SSVSDTSPEE DVAMCLMMLS RDTWQQHKHA NAATPKRRCS SGSEIKKNVR GNHLCHKCHK SFRSSRAFGS HRNVCCPREE GQNNYNNNRS
201: TKVFECPFCY KVFGSGQALG GHKRSHLIPS SSSTVNDSVK LKHSFIDLNL PAPAEDDDLS VVSDA

Best Arabidopsis Sequence Match ( AT2G45120.1 )
(BLAST)

001: MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS QLCDDDDDTE SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR
101: INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG
201: KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA
301: PNEEDETSLV FDEW

Arabidopsis Description

ZAT4Zinc finger protein ZAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.