CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029917_P001	Maize	nucleus	74.09	83.87
Zm00001d047102_P001	Maize	nucleus	69.69	79.12
TraesCS1A01G211800.1	Wheat	nucleus	58.03	67.07
TraesCS1D01G214900.1	Wheat	nucleus	59.07	66.86
TraesCS1B01G225500.1	Wheat	nucleus	58.29	65.98
HORVU1Hr1G054170.1	Barley	nucleus	58.03	65.31
Os10t0555300-01	Rice	mitochondrion, nucleus	59.07	63.51
GSMUA_Achr5P15450_001	Banana	mitochondrion	37.56	52.35
GSMUA_Achr4P26920_001	Banana	mitochondrion	36.27	51.28
KRH57408	Soybean	nucleus	29.27	42.64
EES11238	Sorghum	mitochondrion	35.23	40.84
KRH04135	Soybean	nucleus	27.72	40.68
KRH28087	Soybean	nucleus	30.31	40.62
KRH77360	Soybean	nucleus	30.05	38.93
OQU85696	Sorghum	mitochondrion	31.87	36.5
VIT_00s0229g00050.t01	Wine grape	nucleus	30.31	36.22
PGSC0003DMT400012154	Potato	nucleus	26.94	34.9
Solyc08g078590.1.1	Tomato	nucleus	25.13	34.52
PGSC0003DMT400030986	Potato	nucleus	26.94	34.1
CDY40527	Canola	nucleus	17.1	34.02
CDY09671	Canola	nucleus	17.62	34.0
Solyc06g060740.1.1	Tomato	nucleus	26.94	33.99
CDY50848	Canola	nucleus	17.88	33.01
CDY32274	Canola	nucleus	16.84	32.99
CDY69391	Canola	nucleus	17.88	32.24
Bra040741.1-P	Field mustard	nucleus	17.36	32.06
CDY53641	Canola	nucleus	17.36	32.06
AT4G16610.1	Thale cress	nucleus	16.84	31.86
Bra012701.1-P	Field mustard	nucleus, plastid	17.36	31.31
KRH39952	Soybean	nucleus	24.61	31.05
OQU90180	Sorghum	nucleus, plastid	17.36	28.03
EES16240	Sorghum	nucleus	17.62	23.45
EER97472	Sorghum	nucleus	11.4	22.34
EER90834	Sorghum	nucleus	16.06	21.31
EER92089	Sorghum	nucleus	11.4	21.26
EER92088	Sorghum	nucleus	12.18	19.92
EER92087	Sorghum	nucleus	12.18	18.36
Bra038491.1-P	Field mustard	nucleus	16.84	16.71

Protein Annotations

MapMan:15.5.15	EntrezGene:8057256	UniProt:C5WSG5	EnsemblPlants:EER91950	ProteinID:EER91950	ProteinID:EER91950.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR013087	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374
PANTHER:PTHR26374:SF261	SMART:SM00355	EnsemblPlantsGene:SORBI_3001G301900	SUPFAM:SSF57667	UniParc:UPI0001A824C4	RefSeq:XP_002464952.1
InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:58397408..58399033

Molecular Weight (calculated)

40809.1 Da

IEP (calculated)

7.975

GRAVY (calculated)

-0.722

Length

386 amino acids

Sequence
(BLAST)

001: MDRHTCKLCF RRFHNGRALG GHMRSHVMAA SAAAFHSPLL SRQPQSPPLS LSLASTSSTE MGDDKPSAQQ KPPPTPCVVR EGTKKRFDDS PGFSSRGRAA
101: RGGESSVVQD GESDTESSSP RFAVVSRRRS KRARRRAPPP AVVVASDDPE QPAASSVSDA MPVEDVAMSL VMLSRDSWTR SSRSGRGDPA SSEAVQRQNN
201: DHDDDDDDGV RSFVGVGADD ADHHEHEDDD VVARPPRGGR HHQCGVCRKV FRSYQALGGH RASIKKGKGG CLPVPVPVPP PAAPSSSKSH CRAENNGPAP
301: AVHECPFCFR VFESGQALGG HKRAHMPSSA AGAGAPAPPT TPSPRTPAAK CGDSSGSFDL NVPAAATDDD FELSAVYDTE FGGGRQ

Best Arabidopsis Sequence Match ( AT3G60580.1 )
(BLAST)

001: MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ

Arabidopsis Description

ZAT9Zinc finger protein ZAT9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M202]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.