CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047334_P001	Maize	nucleus	65.62	74.67
Zm00001d029587_P001	Maize	nucleus	72.27	74.6
Zm00001d029589_P001	Maize	nucleus	57.81	70.48
EER92088	Sorghum	nucleus	59.38	64.41
TraesCS7B01G065700.1	Wheat	nucleus	53.12	63.85
TraesCS7D01G161800.1	Wheat	nucleus	50.78	62.5
TraesCS7A01G160700.2	Wheat	nucleus	52.34	62.33
Os03t0437200-01	Rice	cytosol, nucleus, vacuole	46.48	54.09
EER92089	Sorghum	nucleus	37.89	46.86
EER97472	Sorghum	nucleus	30.86	40.1
OQU90180	Sorghum	nucleus, plastid	27.34	29.29
EER90834	Sorghum	nucleus	32.03	28.18
EES16240	Sorghum	nucleus	31.25	27.59
EES11238	Sorghum	mitochondrion	22.27	17.12
CDY70162	Canola	nucleus	14.06	16.82
OQU85696	Sorghum	mitochondrion	21.48	16.32
CDY42873	Canola	nucleus	15.23	15.66
CDY23066	Canola	plastid	16.8	15.64
Bra012953.1-P	Field mustard	plastid	16.8	15.64
Bra029315.1-P	Field mustard	nucleus	14.06	15.45
CDY02142	Canola	nucleus	16.41	15.44
AT5G61470.1	Thale cress	nucleus	17.58	14.8
EER91950	Sorghum	mitochondrion, plastid	18.36	12.18

Protein Annotations

MapMan:15.5.15	EntrezGene:8066257	UniProt:C5WVL8	EnsemblPlants:EER92087	ProteinID:EER92087	ProteinID:EER92087.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR013087	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374
PANTHER:PTHR26374:SF189	SMART:SM00355	EnsemblPlantsGene:SORBI_3001G330100	SUPFAM:SSF57667	SignalP:SignalP-noTM	UniParc:UPI0001A81FF3
RefSeq:XP_002465089.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:61774687..61775673

Molecular Weight (calculated)

26640.3 Da

IEP (calculated)

8.496

GRAVY (calculated)

-0.350

Length

256 amino acids

Sequence
(BLAST)

001: MAAGSEALLD ATALSLSLAL PTTTPAPGLV AGLKINKEDY LAICLAALAG TRGTGLSNKA VVAGFGLPQH QGQGHGNNNN KQQQWCPPPA ALAHEEQLRF
101: RCAVCGKAFA SYQALGGHKS SHRKPPTPEQ YAAAAAAQQQ EAVSAPDSEE TTTTTTSSSG GTTSTGGPHR CTICRKGFAT GQALGGHKRC HYWDGTSSVS
201: VSMSASASAT GSSSAVTVRN FDLNLMPVPE NAGMKRWVEE EEVQSPLPIK KRRILD

Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)

001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL

Arabidopsis Description

ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.