Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012701.1-P | Field mustard | nucleus, plastid | 97.2 | 97.2 |
| CDY09671 | Canola | nucleus | 86.45 | 92.5 |
| CDY53641 | Canola | nucleus | 85.05 | 87.08 |
| CDY50848 | Canola | nucleus | 83.64 | 85.65 |
| AT4G16610.1 | Thale cress | nucleus | 78.97 | 82.84 |
| CDY32274 | Canola | nucleus | 74.77 | 81.22 |
| CDY40527 | Canola | nucleus | 72.9 | 80.41 |
| KRH57408 | Soybean | nucleus | 42.52 | 34.34 |
| KRH04135 | Soybean | nucleus | 40.65 | 33.08 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 37.38 | 29.3 |
| KRH28087 | Soybean | nucleus | 39.25 | 29.17 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 43.46 | 28.79 |
| GSMUA_Achr2P18480_001 | Banana | nucleus | 32.24 | 28.16 |
| KRH77360 | Soybean | nucleus | 38.78 | 27.85 |
| CDX89061 | Canola | nucleus | 34.11 | 27.76 |
| CDY71582 | Canola | nucleus | 35.05 | 27.57 |
| CDX71799 | Canola | nucleus | 33.18 | 27.31 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 27.57 | 27.06 |
| CDY41155 | Canola | nucleus | 31.31 | 27.02 |
| CDX67836 | Canola | nucleus | 36.92 | 26.78 |
| CDY37027 | Canola | nucleus | 35.05 | 26.69 |
| CDY27394 | Canola | nucleus | 35.05 | 26.32 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 28.04 | 26.09 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 33.64 | 25.99 |
| CDX95629 | Canola | nucleus | 32.71 | 25.55 |
| PGSC0003DMT400030986 | Potato | nucleus | 35.98 | 25.25 |
| Solyc06g060740.1.1 | Tomato | nucleus | 35.98 | 25.16 |
| PGSC0003DMT400012154 | Potato | nucleus | 34.11 | 24.5 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 33.64 | 24.49 |
| CDX83402 | Canola | nucleus | 33.64 | 24.16 |
| HORVU0Hr1G030680.1 | Barley | nucleus | 35.05 | 23.96 |
| HORVU6Hr1G063280.1 | Barley | mitochondrion, nucleus, plastid | 35.05 | 23.96 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 35.05 | 23.89 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 35.05 | 23.89 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 32.71 | 23.81 |
| CDY48363 | Canola | nucleus | 31.78 | 23.69 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 21.5 | 23.59 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 34.58 | 23.49 |
| GSMUA_Achr5P13370_001 | Banana | mitochondrion, nucleus | 32.24 | 23.31 |
| Zm00001d002731_P001 | Maize | nucleus | 33.18 | 23.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.3 | 22.81 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 32.71 | 22.8 |
| GSMUA_Achr1P01550_001 | Banana | nucleus | 31.31 | 22.79 |
| Solyc08g078590.1.1 | Tomato | nucleus | 29.91 | 22.78 |
| TraesCS2B01G431800.1 | Wheat | nucleus | 32.71 | 22.65 |
| OQU85696 | Sorghum | mitochondrion | 35.05 | 22.26 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 27.57 | 22.18 |
| TraesCS1A01G211800.1 | Wheat | nucleus | 34.58 | 22.16 |
| EES11238 | Sorghum | mitochondrion | 34.11 | 21.92 |
| Zm00001d017497_P001 | Maize | mitochondrion | 31.78 | 21.52 |
| TraesCS1B01G225500.1 | Wheat | nucleus | 34.11 | 21.41 |
| TraesCS1D01G214900.1 | Wheat | nucleus | 34.11 | 21.41 |
| HORVU1Hr1G054170.1 | Barley | nucleus | 34.11 | 21.28 |
| Os10t0555300-01 | Rice | mitochondrion, nucleus | 35.51 | 21.17 |
| CDY02102 | Canola | nucleus | 15.42 | 20.89 |
| Zm00001d047102_P001 | Maize | nucleus | 33.18 | 20.88 |
| Zm00001d029917_P001 | Maize | nucleus | 32.71 | 20.53 |
| Zm00001d051371_P001 | Maize | mitochondrion | 32.24 | 20.35 |
| Os02t0659500-01 | Rice | mitochondrion | 31.31 | 19.65 |
| CDY23027 | Canola | nucleus | 15.42 | 19.41 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 20.56 | 19.13 |
| EER91950 | Sorghum | mitochondrion, plastid | 32.24 | 17.88 |
| CDY22361 | Canola | nucleus | 15.42 | 17.84 |
| CDY30794 | Canola | nucleus | 15.42 | 17.46 |
| CDX81313 | Canola | nucleus | 14.49 | 16.67 |
| CDY43576 | Canola | nucleus | 15.42 | 15.79 |
| CDY18661 | Canola | nucleus | 14.49 | 14.98 |
| CDY37851 | Canola | nucleus | 14.95 | 14.88 |
| CDY03945 | Canola | nucleus | 15.89 | 14.72 |
| CDX68559 | Canola | nucleus | 15.42 | 14.67 |
| CDY51312 | Canola | nucleus | 14.95 | 14.55 |
| CDX83103 | Canola | nucleus | 14.95 | 14.41 |
| CDX90105 | Canola | nucleus | 15.42 | 14.16 |
| CDY11770 | Canola | nucleus | 15.42 | 14.16 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 24.3 | 14.09 |
| CDX70236 | Canola | nucleus, plastid | 14.95 | 14.04 |
| CDX84907 | Canola | nucleus | 14.95 | 13.97 |
| CDX68558 | Canola | nucleus | 14.49 | 13.96 |
| CDY02142 | Canola | nucleus | 17.29 | 13.6 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 22.9 | 13.57 |
| CDY27629 | Canola | nucleus | 14.49 | 13.54 |
| CDY23066 | Canola | plastid | 17.29 | 13.45 |
| CDX82290 | Canola | nucleus | 16.82 | 13.38 |
| CDY65161 | Canola | nucleus | 16.36 | 13.06 |
| CDY08718 | Canola | nucleus | 14.49 | 12.86 |
| CDY36493 | Canola | nucleus | 14.49 | 12.86 |
| CDX99202 | Canola | nucleus | 15.89 | 12.78 |
| CDY46162 | Canola | nucleus | 15.89 | 12.73 |
| CDX95435 | Canola | nucleus | 15.42 | 12.64 |
| CDY42192 | Canola | nucleus | 15.42 | 12.5 |
| CDY42873 | Canola | nucleus | 13.55 | 11.65 |
| CDY70162 | Canola | nucleus | 8.41 | 8.41 |
| CDY50966 | Canola | nucleus | 14.49 | 8.31 |
| CDY28108 | Canola | nucleus | 14.95 | 7.1 |
Protein Annotations
| EnsemblPlants:CDY69391 | EnsemblPlantsGene:GSBRNA2T00087368001 | GO:A0A078JUY1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF185 | PFAM:PF13912 | PFscan:PS50157 |
| ProteinID:CDY69391 | ProteinID:CDY69391.1 | ScanProsite:PS00028 | SEG:seg | UniParc:UPI0004EE76F2 | UniProt:A0A078JUY1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g58060DBnaA03g58060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUY1]
Coordinates
chrLK039317:+:906..1709
Molecular Weight (calculated)
23941.6 Da
IEP (calculated)
10.418
GRAVY (calculated)
-1.006
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKHKCKLCS KSFCNGRALG GHMKSHLVSS HTPTRKKLLG DSVYSSSSSS DGKTLAYGLR ENPRKSCRVF NPDPESSTVY NSETETEPES VDPVRKRRRA
101: DVSKKNKKKT RSKKRVFENS SEPGKKQTKR SKSNSNESPE PASSVSDGSP EQDLAMCLMM LSRDSREVKL KKPIIKAEEI KPEKRHVPEL RRCMLDLNLP
201: PPQESDVVAV VSAI
101: DVSKKNKKKT RSKKRVFENS SEPGKKQTKR SKSNSNESPE PASSVSDGSP EQDLAMCLMM LSRDSREVKL KKPIIKAEEI KPEKRHVPEL RRCMLDLNLP
201: PPQESDVVAV VSAI
001: MQNKHKCKLC SKSFCNGRAL GGHMKSHLVS SQSSARKKLG DSVYSSSSSS SDGKALAYGL RENPRKSFRV FNPDPESSTI YNSETETEPE SGDPVKKRVR
101: GDVSKKKKKK AKSKRVFENS KKQKTIHESP EPASSVSDGS PEQDLAMCLM MLSRDSRELE IKLKKPEEER KPEKRHFPEL RRCMIDLNLP PPQEAEAVTV
201: VSAI
101: GDVSKKKKKK AKSKRVFENS KKQKTIHESP EPASSVSDGS PEQDLAMCLM MLSRDSRELE IKLKKPEEER KPEKRHFPEL RRCMIDLNLP PPQEAEAVTV
201: VSAI
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:O23504]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.