Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038219.1-P | Field mustard | nucleus | 97.73 | 97.73 |
| CDX95435 | Canola | nucleus | 95.83 | 96.93 |
| CDY65161 | Canola | nucleus | 82.2 | 80.97 |
| CDX82290 | Canola | nucleus | 81.82 | 80.3 |
| CDX99202 | Canola | nucleus | 77.27 | 76.69 |
| CDY46162 | Canola | nucleus | 76.89 | 76.03 |
| AT3G19580.1 | Thale cress | nucleus | 78.03 | 75.46 |
| CDY22361 | Canola | nucleus | 37.12 | 52.97 |
| CDY30794 | Canola | nucleus | 36.74 | 51.32 |
| CDY02102 | Canola | nucleus | 29.55 | 49.37 |
| CDX81313 | Canola | nucleus | 32.58 | 46.24 |
| CDY23027 | Canola | nucleus | 29.55 | 45.88 |
| CDX84907 | Canola | nucleus | 39.39 | 45.41 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 34.85 | 45.1 |
| CDX90105 | Canola | nucleus | 39.77 | 45.06 |
| CDY11770 | Canola | nucleus | 39.77 | 45.06 |
| CDY27629 | Canola | nucleus | 39.02 | 44.98 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 37.12 | 44.75 |
| CDY03945 | Canola | nucleus | 38.64 | 44.16 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 35.98 | 43.38 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 35.98 | 43.18 |
| CDY43576 | Canola | nucleus | 34.09 | 43.06 |
| CDX83103 | Canola | nucleus | 35.61 | 42.34 |
| CDY37851 | Canola | nucleus | 34.47 | 42.33 |
| CDY18661 | Canola | nucleus | 32.95 | 42.03 |
| CDX70236 | Canola | nucleus, plastid | 35.98 | 41.67 |
| CDX68558 | Canola | nucleus | 34.85 | 41.44 |
| CDX68559 | Canola | nucleus | 35.23 | 41.33 |
| CDY51312 | Canola | nucleus | 34.09 | 40.91 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 35.98 | 39.75 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 35.61 | 39.5 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 35.98 | 39.42 |
| Os12t0583700-00 | Rice | nucleus | 35.98 | 38.46 |
| Os03t0610400-01 | Rice | nucleus | 34.47 | 38.24 |
| CDY08718 | Canola | nucleus | 34.85 | 38.17 |
| CDY36493 | Canola | nucleus | 34.09 | 37.34 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 34.47 | 36.84 |
| Zm00001d030858_P001 | Maize | nucleus | 32.58 | 31.05 |
| EES16240 | Sorghum | nucleus | 32.95 | 30.0 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 30.68 | 29.35 |
| CDX95629 | Canola | nucleus | 27.65 | 26.64 |
| CDY41155 | Canola | nucleus | 25.0 | 26.61 |
| CDX89061 | Canola | nucleus | 25.76 | 25.86 |
| CDX71799 | Canola | nucleus | 25.38 | 25.77 |
| CDY71582 | Canola | nucleus | 26.14 | 25.37 |
| CDY37027 | Canola | nucleus | 26.89 | 25.27 |
| CDY27394 | Canola | nucleus | 26.89 | 24.91 |
| CDX83402 | Canola | nucleus | 27.27 | 24.16 |
| CDY48363 | Canola | nucleus | 26.14 | 24.04 |
| CDX67836 | Canola | nucleus | 26.52 | 23.73 |
| CDY50966 | Canola | nucleus | 29.92 | 21.18 |
| CDY28108 | Canola | nucleus | 31.44 | 18.4 |
| CDY70162 | Canola | nucleus | 14.77 | 18.22 |
| CDY02142 | Canola | nucleus | 18.56 | 18.01 |
| CDY23066 | Canola | plastid | 18.56 | 17.82 |
| CDY40527 | Canola | nucleus | 12.88 | 17.53 |
| CDY42873 | Canola | nucleus | 16.29 | 17.27 |
| CDY32274 | Canola | nucleus | 12.5 | 16.75 |
| CDY09671 | Canola | nucleus | 12.5 | 16.5 |
| CDY53641 | Canola | nucleus | 12.5 | 15.79 |
| CDY50848 | Canola | nucleus | 12.5 | 15.79 |
| CDY69391 | Canola | nucleus | 12.5 | 15.42 |
Protein Annotations
| EnsemblPlants:CDY42192 | EnsemblPlantsGene:GSBRNA2T00074402001 | Gene3D:3.30.160.60 | GO:A0A078HWJ4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY42192 | ProteinID:CDY42192.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EE55C0 | UniProt:A0A078HWJ4 | MapMan:15.5.15 | : |
Description
BnaA01g26030DBnaA01g26030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWJ4]
Coordinates
chrLK032518:-:10675..11514
Molecular Weight (calculated)
28932.4 Da
IEP (calculated)
9.928
GRAVY (calculated)
-0.695
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAMNSPS FTVRKDRIAA TDDDLTNDAV FMEPWLKRKR TKRQRSRSPS PSTSSSSPPR SRRPKSESQD LTEEEYLALC LLKLAKDKHS PPPQPQPRDS
101: TKLSYKCSVC GKAFPSYQAL GGHKASHRIK PLTADNSTSP IIAGEKHHSS ATVPPSGKIH ECSICRKVFP TGQALGGHKR CHYEGNLGGG SKSISQSGSV
201: SSTVSEDRSN RVLIDLNLPA LPELSLHHNP VVDDEILSPL TGKKPLLLTD RDQVIKKEDL SLRI
101: TKLSYKCSVC GKAFPSYQAL GGHKASHRIK PLTADNSTSP IIAGEKHHSS ATVPPSGKIH ECSICRKVFP TGQALGGHKR CHYEGNLGGG SKSISQSGSV
201: SSTVSEDRSN RVLIDLNLPA LPELSLHHNP VVDDEILSPL TGKKPLLLTD RDQVIKKEDL SLRI
001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
Arabidopsis Description
AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.