Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022436.1-P | Field mustard | nucleus | 94.74 | 94.38 |
| CDY46162 | Canola | nucleus | 94.36 | 94.01 |
| CDX82290 | Canola | nucleus | 80.08 | 79.18 |
| CDY65161 | Canola | nucleus | 79.7 | 79.1 |
| CDX95435 | Canola | nucleus | 76.69 | 78.16 |
| CDY42192 | Canola | nucleus | 76.69 | 77.27 |
| AT3G19580.1 | Thale cress | nucleus | 77.82 | 75.82 |
| CDY22361 | Canola | nucleus | 36.09 | 51.89 |
| CDY30794 | Canola | nucleus | 36.09 | 50.79 |
| CDY02102 | Canola | nucleus | 29.32 | 49.37 |
| CDX81313 | Canola | nucleus | 33.08 | 47.31 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 38.72 | 47.03 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 35.71 | 46.57 |
| CDY23027 | Canola | nucleus | 29.32 | 45.88 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 37.59 | 45.66 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 37.22 | 45.0 |
| CDX90105 | Canola | nucleus | 39.1 | 44.64 |
| CDX84907 | Canola | nucleus | 38.35 | 44.54 |
| CDY11770 | Canola | nucleus | 38.72 | 44.21 |
| CDY27629 | Canola | nucleus | 37.97 | 44.1 |
| CDX70236 | Canola | nucleus, plastid | 37.22 | 43.42 |
| CDY03945 | Canola | nucleus | 37.59 | 43.29 |
| CDY51312 | Canola | nucleus | 35.71 | 43.18 |
| CDY43576 | Canola | nucleus | 33.83 | 43.06 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 38.72 | 42.74 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 38.35 | 42.68 |
| CDX83103 | Canola | nucleus | 35.34 | 42.34 |
| CDY37851 | Canola | nucleus | 34.21 | 42.33 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 37.59 | 42.02 |
| CDX68558 | Canola | nucleus | 34.96 | 41.89 |
| CDX68559 | Canola | nucleus | 35.34 | 41.78 |
| CDY18661 | Canola | nucleus | 32.33 | 41.55 |
| Os03t0610400-01 | Rice | nucleus | 36.47 | 40.76 |
| Os12t0583700-00 | Rice | nucleus | 37.59 | 40.49 |
| CDY08718 | Canola | nucleus | 34.96 | 38.59 |
| CDY36493 | Canola | nucleus | 34.59 | 38.17 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 34.96 | 37.65 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 33.83 | 32.61 |
| Zm00001d030858_P001 | Maize | nucleus | 32.33 | 31.05 |
| EES16240 | Sorghum | nucleus | 33.46 | 30.69 |
| CDY41155 | Canola | nucleus | 24.81 | 26.61 |
| CDY37027 | Canola | nucleus | 27.82 | 26.33 |
| CDY27394 | Canola | nucleus | 27.82 | 25.96 |
| CDX95629 | Canola | nucleus | 26.69 | 25.91 |
| CDX71799 | Canola | nucleus | 25.19 | 25.77 |
| CDX89061 | Canola | nucleus | 25.19 | 25.48 |
| CDY71582 | Canola | nucleus | 25.56 | 25.0 |
| CDX83402 | Canola | nucleus | 27.07 | 24.16 |
| CDX67836 | Canola | nucleus | 26.32 | 23.73 |
| CDY48363 | Canola | nucleus | 25.56 | 23.69 |
| CDY50966 | Canola | nucleus | 28.95 | 20.64 |
| CDY70162 | Canola | nucleus | 15.41 | 19.16 |
| CDY28108 | Canola | nucleus | 31.2 | 18.4 |
| CDY40527 | Canola | nucleus | 13.16 | 18.04 |
| CDY02142 | Canola | nucleus | 18.05 | 17.65 |
| CDY23066 | Canola | plastid | 18.05 | 17.45 |
| CDY42873 | Canola | nucleus | 16.17 | 17.27 |
| CDY32274 | Canola | nucleus | 12.78 | 17.26 |
| CDY09671 | Canola | nucleus | 12.78 | 17.0 |
| CDY53641 | Canola | nucleus | 12.78 | 16.27 |
| CDY50848 | Canola | nucleus | 12.78 | 16.27 |
| CDY69391 | Canola | nucleus | 12.78 | 15.89 |
Protein Annotations
| EnsemblPlants:CDX99202 | EnsemblPlantsGene:GSBRNA2T00107392001 | Gene3D:3.30.160.60 | GO:A0A078EDT5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX99202 | ProteinID:CDX99202.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EE0789 | MapMan:15.5.15 | : | : |
Description
BnaC05g33170D
Coordinates
chrLK031909:+:32552..33352
Molecular Weight (calculated)
28999.2 Da
IEP (calculated)
8.695
GRAVY (calculated)
-0.711
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAMNCPT NSSSFTARED RNEPTDDLTN DAVFMEPWLK RKRSKRQRSG SPSSSPPRSR PKSQIQDLAE EEYLALCLLM LANNHHQPKR RPQESTTKLS
101: HKCSVCGKAF PSYQALGGHK ASHRIKPPTT TADDDSTPPT IAVAHPTSTA IAPSGKIHEC SICHKVFPTG QALGGHKRCH YEGTIGGGGG SKSVSQSGSV
201: TSTVSEERSN RAFIDLNLPA LPELSLHHHN PVVDEEIQSP LTGKKPLLLT DHDKASIKKE DFSLRI
101: HKCSVCGKAF PSYQALGGHK ASHRIKPPTT TADDDSTPPT IAVAHPTSTA IAPSGKIHEC SICHKVFPTG QALGGHKRCH YEGTIGGGGG SKSVSQSGSV
201: TSTVSEERSN RAFIDLNLPA LPELSLHHHN PVVDEEIQSP LTGKKPLLLT DHDKASIKKE DFSLRI
001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
Arabidopsis Description
AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.