Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032845.1-P | Field mustard | nucleus | 98.69 | 98.69 |
| CDX84907 | Canola | nucleus | 98.69 | 98.69 |
| CDY11770 | Canola | nucleus | 89.08 | 87.55 |
| CDX90105 | Canola | nucleus | 88.21 | 86.7 |
| AT1G27730.1 | Thale cress | nucleus | 84.28 | 85.02 |
| CDY03945 | Canola | nucleus | 82.97 | 82.25 |
| CDY22361 | Canola | nucleus | 62.45 | 77.3 |
| CDY30794 | Canola | nucleus | 60.7 | 73.55 |
| CDX70236 | Canola | nucleus, plastid | 68.12 | 68.42 |
| CDY51312 | Canola | nucleus | 62.01 | 64.55 |
| KRH15443 | Soybean | nucleus | 50.66 | 49.79 |
| CDY02102 | Canola | nucleus | 33.62 | 48.73 |
| KRH05601 | Soybean | nucleus | 50.66 | 48.33 |
| CDX81313 | Canola | nucleus | 37.99 | 46.77 |
| CDY23027 | Canola | nucleus | 34.06 | 45.88 |
| CDY43576 | Canola | nucleus | 39.74 | 43.54 |
| CDY18661 | Canola | nucleus | 37.99 | 42.03 |
| CDY37851 | Canola | nucleus | 39.3 | 41.86 |
| CDX68558 | Canola | nucleus | 39.74 | 40.99 |
| CDX83103 | Canola | nucleus | 39.74 | 40.99 |
| CDX68559 | Canola | nucleus | 40.17 | 40.89 |
| PGSC0003DMT400084751 | Potato | nucleus | 45.85 | 40.08 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 38.43 | 40.0 |
| CDX82290 | Canola | nucleus | 46.72 | 39.78 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 37.99 | 39.73 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 34.93 | 39.22 |
| CDX95435 | Canola | nucleus | 44.54 | 39.08 |
| CDY42192 | Canola | nucleus | 44.98 | 39.02 |
| CDY65161 | Canola | nucleus | 45.41 | 38.81 |
| CDX99202 | Canola | nucleus | 44.1 | 37.97 |
| CDY46162 | Canola | nucleus | 43.67 | 37.45 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 35.81 | 37.44 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 37.99 | 36.55 |
| CDY08718 | Canola | nucleus | 38.43 | 36.51 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 38.43 | 36.51 |
| Os12t0583700-00 | Rice | nucleus | 39.3 | 36.44 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 37.99 | 36.4 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 38.86 | 36.03 |
| Os03t0610400-01 | Rice | nucleus | 37.12 | 35.71 |
| CDY36493 | Canola | nucleus | 37.55 | 35.68 |
| Solyc01g107170.2.1 | Tomato | nucleus | 46.29 | 34.19 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 38.43 | 31.88 |
| Zm00001d030858_P001 | Maize | nucleus | 36.24 | 29.96 |
| EES16240 | Sorghum | nucleus | 36.24 | 28.62 |
| CDX89061 | Canola | nucleus | 27.95 | 24.33 |
| CDY41155 | Canola | nucleus | 25.76 | 23.79 |
| CDY71582 | Canola | nucleus | 27.51 | 23.16 |
| CDX95629 | Canola | nucleus | 27.51 | 22.99 |
| CDY37027 | Canola | nucleus | 27.95 | 22.78 |
| CDY27394 | Canola | nucleus | 27.95 | 22.46 |
| CDX71799 | Canola | nucleus | 25.33 | 22.31 |
| CDX67836 | Canola | nucleus | 28.38 | 22.03 |
| CDX83402 | Canola | nucleus | 28.38 | 21.81 |
| CDY48363 | Canola | nucleus | 26.2 | 20.91 |
| CDY50966 | Canola | nucleus | 31.88 | 19.57 |
| CDY70162 | Canola | nucleus | 17.03 | 18.22 |
| CDY42873 | Canola | nucleus | 19.21 | 17.67 |
| CDY28108 | Canola | nucleus | 34.06 | 17.29 |
| CDY02142 | Canola | nucleus | 20.52 | 17.28 |
| CDY23066 | Canola | plastid | 20.52 | 17.09 |
| CDY40527 | Canola | nucleus | 13.1 | 15.46 |
| CDY09671 | Canola | nucleus | 13.1 | 15.0 |
| CDY50848 | Canola | nucleus | 13.54 | 14.83 |
| CDY53641 | Canola | nucleus | 13.54 | 14.83 |
| CDY32274 | Canola | nucleus | 12.66 | 14.72 |
| CDY69391 | Canola | nucleus | 13.54 | 14.49 |
Protein Annotations
| EnsemblPlants:CDY27629 | EnsemblPlantsGene:GSBRNA2T00038383001 | Gene3D:3.30.160.60 | GO:A0A078GR01 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY27629 | ProteinID:CDY27629.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EDDA3B | UniProt:A0A078GR01 | MapMan:15.5.15 | : |
Description
BnaA09g27780DBnaA09g27780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR01]
Coordinates
chrLK032207:-:403757..404446
Molecular Weight (calculated)
24606.4 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.681
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAISSPR LASPVPPLFE DSSRFHGVDH WTKGKRSKRS RSDFHHKNLT EEEYLAFCLL LLARDGDRSN RNPLPPPPVT VAEKSSTYTC SVCDKSFSSY
101: QALGGHKASH RKNLSQTLSG GGDDQSTSTT SAVTTGSGKS HVCSICHKSF PSGQALGGHK RCHYEGNNNS SSSVANSEGA GSTSHVSSGH RGFDLNIPPV
201: PEFSLVNGDD EVMSPMPAKK PRFDFSEKA
101: QALGGHKASH RKNLSQTLSG GGDDQSTSTT SAVTTGSGKS HVCSICHKSF PSGQALGGHK RCHYEGNNNS SSSVANSEGA GSTSHVSSGH RGFDLNIPPV
201: PEFSLVNGDD EVMSPMPAKK PRFDFSEKA
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.