Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81313 | Canola | nucleus | 85.02 | 94.62 |
| Bra037845.1-P | Field mustard | nucleus | 99.52 | 89.18 |
| CDY43576 | Canola | nucleus | 83.09 | 82.3 |
| CDY37851 | Canola | nucleus | 83.09 | 80.0 |
| CDY08718 | Canola | nucleus | 85.02 | 73.03 |
| AT5G67450.1 | Thale cress | nucleus | 83.09 | 70.2 |
| CDY36493 | Canola | nucleus | 81.16 | 69.71 |
| CDY02102 | Canola | nucleus | 49.76 | 65.19 |
| CDY23027 | Canola | nucleus | 49.28 | 60.0 |
| CDX83103 | Canola | nucleus | 62.32 | 58.11 |
| CDX68558 | Canola | nucleus | 61.84 | 57.66 |
| CDX68559 | Canola | nucleus | 62.32 | 57.33 |
| CDY22361 | Canola | nucleus | 39.61 | 44.32 |
| CDY30794 | Canola | nucleus | 39.13 | 42.86 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 46.86 | 41.63 |
| CDY27629 | Canola | nucleus | 42.03 | 37.99 |
| CDX84907 | Canola | nucleus | 42.03 | 37.99 |
| CDX90105 | Canola | nucleus | 42.51 | 37.77 |
| CDY11770 | Canola | nucleus | 42.51 | 37.77 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 37.2 | 37.75 |
| CDY03945 | Canola | nucleus | 42.03 | 37.66 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 39.61 | 37.27 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 38.65 | 36.53 |
| CDY51312 | Canola | nucleus | 38.65 | 36.36 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 38.16 | 36.07 |
| CDX70236 | Canola | nucleus, plastid | 38.16 | 34.65 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 39.61 | 34.31 |
| Os03t0610400-01 | Rice | nucleus | 39.13 | 34.03 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 38.65 | 33.61 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 39.13 | 33.61 |
| CDY65161 | Canola | nucleus | 43.0 | 33.21 |
| CDY42192 | Canola | nucleus | 42.03 | 32.95 |
| CDX95435 | Canola | nucleus | 41.55 | 32.95 |
| CDX82290 | Canola | nucleus | 42.51 | 32.71 |
| CDX99202 | Canola | nucleus | 41.55 | 32.33 |
| CDY46162 | Canola | nucleus | 41.06 | 31.84 |
| Os12t0583700-00 | Rice | nucleus | 37.2 | 31.17 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 36.23 | 30.36 |
| Zm00001d030858_P001 | Maize | nucleus | 35.27 | 26.35 |
| EES16240 | Sorghum | nucleus | 36.23 | 25.86 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 31.88 | 23.91 |
| CDX95629 | Canola | nucleus | 30.43 | 22.99 |
| CDY37027 | Canola | nucleus | 30.92 | 22.78 |
| CDY41155 | Canola | nucleus | 26.57 | 22.18 |
| CDX89061 | Canola | nucleus | 28.02 | 22.05 |
| CDY27394 | Canola | nucleus | 29.95 | 21.75 |
| CDY71582 | Canola | nucleus | 28.02 | 21.32 |
| CDX71799 | Canola | nucleus | 26.57 | 21.15 |
| CDX83402 | Canola | nucleus | 29.47 | 20.47 |
| CDX67836 | Canola | nucleus | 28.99 | 20.34 |
| CDY48363 | Canola | nucleus | 27.05 | 19.51 |
| CDY70162 | Canola | nucleus | 19.81 | 19.16 |
| CDY42873 | Canola | nucleus | 22.22 | 18.47 |
| CDY50966 | Canola | nucleus | 32.85 | 18.23 |
| CDY02142 | Canola | nucleus | 23.67 | 18.01 |
| CDY23066 | Canola | plastid | 23.67 | 17.82 |
| CDY40527 | Canola | nucleus | 14.98 | 15.98 |
| CDY32274 | Canola | nucleus | 14.49 | 15.23 |
| CDY09671 | Canola | nucleus | 14.49 | 15.0 |
| CDY53641 | Canola | nucleus | 14.98 | 14.83 |
| CDY50848 | Canola | nucleus | 14.98 | 14.83 |
| CDY28108 | Canola | nucleus | 31.88 | 14.63 |
| CDY69391 | Canola | nucleus | 14.98 | 14.49 |
Protein Annotations
| EnsemblPlants:CDY18661 | EnsemblPlantsGene:GSBRNA2T00005729001 | Gene3D:3.30.160.60 | GO:A0A078G064 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY18661 | ProteinID:CDY18661.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EDBAA7 | UniProt:A0A078G064 | MapMan:15.5.15 | : |
Description
BnaA09g07340DBnaA09g07340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G064]
Coordinates
chrLK032087:-:359929..360955
Molecular Weight (calculated)
22837.6 Da
IEP (calculated)
9.046
GRAVY (calculated)
-0.855
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLNSPT SATATARPFL RYRKEMEPEN LEQWAKRKRT KRQRFDHNQE KTPSEEEYLA LCLLMLARGS TVQSLPPPSL PSSDHRGYKC TVCGKSFSSY
101: QALGGHKTSH RKPVNNTDVP SNQEPFNNTH RNSNGGSVVI NGNGVSQSGK THTCSICFKS FSSGQALGGH KRCHYDDDER SSEQSGIGGH RGFDLNLPAD
201: QVTVVIS
101: QALGGHKTSH RKPVNNTDVP SNQEPFNNTH RNSNGGSVVI NGNGVSQSGK THTCSICFKS FSSGQALGGH KRCHYDDDER SSEQSGIGGH RGFDLNLPAD
201: QVTVVIS
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.