Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11770 | Canola | nucleus | 89.87 | 87.55 |
| CDX90105 | Canola | nucleus | 88.55 | 86.27 |
| Bra010922.1-P | Field mustard | nucleus | 88.55 | 86.27 |
| CDY03945 | Canola | nucleus | 86.34 | 84.85 |
| CDY27629 | Canola | nucleus | 85.02 | 84.28 |
| CDX84907 | Canola | nucleus | 85.02 | 84.28 |
| Bra032845.1-P | Field mustard | nucleus | 83.7 | 82.97 |
| AT5G43170.1 | Thale cress | nucleus | 59.47 | 69.95 |
| AT5G04340.1 | Thale cress | nucleus | 73.13 | 69.75 |
| KRH15443 | Soybean | nucleus | 50.22 | 48.93 |
| KRH05601 | Soybean | nucleus | 51.1 | 48.33 |
| AT3G49930.1 | Thale cress | nucleus | 38.77 | 40.93 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 38.77 | 40.0 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 38.33 | 39.73 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 35.24 | 39.22 |
| PGSC0003DMT400084751 | Potato | nucleus | 44.49 | 38.55 |
| AT3G19580.1 | Thale cress | nucleus | 46.26 | 38.46 |
| AT5G67450.1 | Thale cress | nucleus | 41.41 | 38.37 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 36.56 | 37.9 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 38.77 | 36.51 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 37.89 | 36.13 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 37.89 | 35.98 |
| Os12t0583700-00 | Rice | nucleus | 38.77 | 35.63 |
| Os03t0610400-01 | Rice | nucleus | 37.0 | 35.29 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 37.89 | 34.82 |
| Solyc01g107170.2.1 | Tomato | nucleus | 44.49 | 32.58 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 38.33 | 31.52 |
| Zm00001d030858_P001 | Maize | nucleus | 37.0 | 30.32 |
| EES16240 | Sorghum | nucleus | 37.0 | 28.97 |
| AT1G02030.1 | Thale cress | nucleus | 28.63 | 24.34 |
| AT3G60580.1 | Thale cress | nucleus | 30.4 | 23.96 |
| AT2G45120.1 | Thale cress | nucleus | 29.52 | 21.34 |
| AT5G61470.1 | Thale cress | nucleus | 22.03 | 16.45 |
| AT4G16610.1 | Thale cress | nucleus | 13.66 | 15.2 |
| AT1G49900.1 | Thale cress | nucleus | 37.89 | 9.38 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:839666 | UniProt:A0A178WMS3 | ProteinID:AAF24959.1 | ProteinID:AEE30870.1 |
| EMBL:AF250336 | ArrayExpress:AT1G27730 | EnsemblPlantsGene:AT1G27730 | RefSeq:AT1G27730 | TAIR:AT1G27730 | RefSeq:AT1G27730-TAIR-G |
| EnsemblPlants:AT1G27730.1 | TAIR:AT1G27730.1 | EMBL:AY034998 | EMBL:AY063006 | ProteinID:CAA67229.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009414 |
| GO:GO:0009611 | GO:GO:0009628 | GO:GO:0009644 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0009987 | GO:GO:0010117 | GO:GO:0010200 | GO:GO:0015979 | GO:GO:0035264 | GO:GO:0040007 |
| GO:GO:0043565 | GO:GO:0045892 | GO:GO:0046872 | InterPro:IPR013087 | RefSeq:NP_174094.1 | ProteinID:OAP18402.1 |
| PFAM:PF13912 | PO:PO:0000013 | PO:PO:0000034 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF319 | UniProt:Q96289 | SMART:SM00355 |
| SUPFAM:SSF57667 | Symbol:STZ | UniParc:UPI00000529FB | EMBL:X95573 | EMBL:X98670 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
Coordinates
chr1:-:9648021..9649323
Molecular Weight (calculated)
24615.8 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.608
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.