Factsheet for AT2G45120.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83402	Canola	nucleus	69.75	73.49
CDY37027	Canola	nucleus	65.61	73.31
Bra040325.1-P	Field mustard	nucleus	65.61	73.31
CDY27394	Canola	nucleus	66.24	72.98
CDX95629	Canola	nucleus	62.74	71.9
Bra000372.1-P	Field mustard	mitochondrion, nucleus	70.7	71.61
AT3G60580.1	Thale cress	nucleus	55.41	60.42
AT1G02030.1	Thale cress	nucleus	38.85	45.69
PGSC0003DMT400053945	Potato	cytosol	21.34	43.79
VIT_15s0021g02720.t01	Wine grape	nucleus	47.45	41.5
Solyc01g090840.2.1	Tomato	nucleus	40.45	39.32
PGSC0003DMT400066939	Potato	nucleus	40.45	38.48
KRH76140	Soybean	nucleus	43.63	37.53
KRH75355	Soybean	nucleus	44.59	35.99
KRH65408	Soybean	nucleus	43.63	35.31
AT4G16610.1	Thale cress	nucleus	21.02	32.35
AT5G43170.1	Thale cress	nucleus	19.43	31.61
AT3G49930.1	Thale cress	nucleus	20.7	30.23
AT1G27730.1	Thale cress	nucleus	21.34	29.52
GSMUA_Achr4P03310_001	Banana	nucleus	23.89	29.07
GSMUA_Achr6P34890_001	Banana	nucleus, plastid	24.84	28.78
GSMUA_Achr9P09370_001	Banana	nucleus	25.16	28.62
AT5G04340.1	Thale cress	nucleus	21.02	27.73
GSMUA_Achr4P32760_001	Banana	nucleus	27.71	26.61
AT3G19580.1	Thale cress	nucleus	22.93	26.37
AT5G61470.1	Thale cress	nucleus	24.2	25.0
AT5G67450.1	Thale cress	nucleus	19.11	24.49
AT1G49900.1	Thale cress	nucleus	20.7	7.09

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:819119	EMBL:AB493591	ProteinID:AEC10509.1	ArrayExpress:AT2G45120
EnsemblPlantsGene:AT2G45120	RefSeq:AT2G45120	TAIR:AT2G45120	RefSeq:AT2G45120-TAIR-G	EnsemblPlants:AT2G45120.1	TAIR:AT2G45120.1
EMBL:AY074655	GO:GO:0003674	GO:GO:0003676	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	InterPro:IPR013087
RefSeq:NP_182037.1	PFAM:PF13912	PO:PO:0000293	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374
PANTHER:PTHR26374:SF304	UniProt:Q9SHD0	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00000AB710	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

ZAT4Zinc finger protein ZAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD0]

Coordinates

chr2:+:18603455..18604878

Molecular Weight (calculated)

35855.5 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.973

Length

314 amino acids

Sequence
(BLAST)

001: MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS QLCDDDDDTE SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR
101: INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG
201: KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA
301: PNEEDETSLV FDEW

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.