Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71582 | Canola | nucleus | 71.53 | 75.74 |
| CDY41155 | Canola | nucleus | 63.54 | 73.79 |
| Bra007545.1-P | Field mustard | nucleus | 75.69 | 73.4 |
| CDY48363 | Canola | nucleus | 72.92 | 73.17 |
| CDX67836 | Canola | nucleus | 74.31 | 72.54 |
| CDX89061 | Canola | nucleus | 65.97 | 72.24 |
| Bra003422.1-P | Field mustard | nucleus | 74.31 | 72.05 |
| CDX71799 | Canola | nucleus | 64.58 | 71.54 |
| Bra014483.1-P | Field mustard | nucleus | 61.46 | 69.41 |
| AT2G45120.1 | Thale cress | nucleus | 60.42 | 55.41 |
| PGSC0003DMT400053945 | Potato | cytosol | 26.04 | 49.02 |
| AT1G02030.1 | Thale cress | nucleus | 41.67 | 44.94 |
| PGSC0003DMT400066939 | Potato | nucleus | 45.83 | 40.0 |
| VIT_15s0021g02720.t01 | Wine grape | nucleus | 49.65 | 39.83 |
| Solyc01g090840.2.1 | Tomato | nucleus | 44.44 | 39.63 |
| KRH76140 | Soybean | nucleus | 48.96 | 38.63 |
| KRH65408 | Soybean | nucleus | 50.35 | 37.37 |
| KRH75355 | Soybean | nucleus | 48.96 | 36.25 |
| AT4G16610.1 | Thale cress | nucleus | 24.31 | 34.31 |
| AT5G43170.1 | Thale cress | nucleus | 21.88 | 32.64 |
| AT3G49930.1 | Thale cress | nucleus | 22.92 | 30.7 |
| GSMUA_Achr4P03310_001 | Banana | nucleus | 27.43 | 30.62 |
| AT1G27730.1 | Thale cress | nucleus | 23.96 | 30.4 |
| GSMUA_Achr6P34890_001 | Banana | nucleus, plastid | 27.43 | 29.15 |
| GSMUA_Achr9P09370_001 | Banana | nucleus | 26.74 | 27.9 |
| AT5G67450.1 | Thale cress | nucleus | 22.92 | 26.94 |
| AT5G04340.1 | Thale cress | nucleus | 22.22 | 26.89 |
| AT3G19580.1 | Thale cress | nucleus | 25.35 | 26.74 |
| GSMUA_Achr4P32760_001 | Banana | nucleus | 28.47 | 25.08 |
| AT5G61470.1 | Thale cress | nucleus | 26.04 | 24.67 |
| AT1G49900.1 | Thale cress | nucleus | 22.22 | 6.98 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:825229 | UniProt:A0A178VAX8 | ProteinID:AEE80081.1 | EMBL:AK118399 |
| ArrayExpress:AT3G60580 | EnsemblPlantsGene:AT3G60580 | RefSeq:AT3G60580 | TAIR:AT3G60580 | RefSeq:AT3G60580-TAIR-G | EnsemblPlants:AT3G60580.1 |
| TAIR:AT3G60580.1 | EMBL:BT005283 | ProteinID:CAB81844.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR013087 | RefSeq:NP_191617.1 | ProteinID:OAP02818.1 |
| PFAM:PF13912 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009030 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF304 | UniProt:Q9M202 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI00000A0349 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
ZAT9Zinc finger protein ZAT9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M202]
Coordinates
chr3:+:22393823..22395244
Molecular Weight (calculated)
32734.3 Da
IEP (calculated)
8.830
GRAVY (calculated)
-0.985
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.