Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009464.1-P | Field mustard | plastid | 80.25 | 83.77 |
| CDX70236 | Canola | nucleus, plastid | 79.83 | 83.33 |
| CDY51312 | Canola | nucleus | 74.79 | 80.91 |
| AT1G27730.1 | Thale cress | nucleus | 69.75 | 73.13 |
| AT5G43170.1 | Thale cress | nucleus | 52.94 | 65.28 |
| KRH15443 | Soybean | nucleus | 44.96 | 45.92 |
| KRH05601 | Soybean | nucleus | 45.38 | 45.0 |
| AT3G49930.1 | Thale cress | nucleus | 35.71 | 39.53 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 36.13 | 39.09 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 35.29 | 38.36 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 32.77 | 38.24 |
| AT5G67450.1 | Thale cress | nucleus | 39.08 | 37.96 |
| PGSC0003DMT400084751 | Potato | nucleus | 41.6 | 37.79 |
| AT3G19580.1 | Thale cress | nucleus | 42.44 | 37.0 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 34.03 | 36.99 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 37.82 | 36.44 |
| Os03t0610400-01 | Rice | nucleus | 36.13 | 36.13 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 36.13 | 36.13 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 36.55 | 36.1 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 35.71 | 35.56 |
| Os12t0583700-00 | Rice | nucleus | 35.71 | 34.41 |
| Solyc01g107170.2.1 | Tomato | nucleus | 42.02 | 32.26 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 34.03 | 29.35 |
| Zm00001d030858_P001 | Maize | nucleus | 33.61 | 28.88 |
| EES16240 | Sorghum | nucleus | 34.03 | 27.93 |
| AT1G02030.1 | Thale cress | nucleus | 26.89 | 23.97 |
| AT3G60580.1 | Thale cress | nucleus | 26.89 | 22.22 |
| AT2G45120.1 | Thale cress | nucleus | 27.73 | 21.02 |
| AT4G16610.1 | Thale cress | nucleus | 13.03 | 15.2 |
| AT5G61470.1 | Thale cress | nucleus | 19.33 | 15.13 |
| AT1G49900.1 | Thale cress | nucleus | 33.61 | 8.72 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:830313 | ProteinID:AED90729.1 | EMBL:AF022658 | EMBL:AK118868 | ArrayExpress:AT5G04340 |
| EnsemblPlantsGene:AT5G04340 | RefSeq:AT5G04340 | TAIR:AT5G04340 | RefSeq:AT5G04340-TAIR-G | EnsemblPlants:AT5G04340.1 | TAIR:AT5G04340.1 |
| Symbol:C2H2 | GO:GO:0000978 | GO:GO:0001047 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0044212 | GO:GO:0046872 |
| GO:GO:0055062 | GO:GO:2000280 | InterPro:IPR013087 | RefSeq:NP_196054.1 | UniProt:O22533 | PFAM:PF13912 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF319 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000009D205 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
ZAT6Zinc finger protein ZAT6 [Source:UniProtKB/Swiss-Prot;Acc:O22533]
Coordinates
chr5:-:1216058..1217362
Molecular Weight (calculated)
25253.7 Da
IEP (calculated)
8.152
GRAVY (calculated)
-0.480
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLTSPR LSSPMPTLFQ DSALGFHGSK GKRSKRSRSE FDRQSLTEDE YIALCLMLLA RDGDRNRDLD LPSSSSSPPL LPPLPTPIYK CSVCDKAFSS
101: YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR
201: GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP
101: YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR
201: GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.