Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 36.09 | 42.56 |
| GSMUA_Achr11P... | Banana | mitochondrion, nucleus | 32.17 | 32.17 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 36.09 | 31.2 |
| GSMUA_Achr2P18480_001 | Banana | nucleus | 33.04 | 31.02 |
| KRH57408 | Soybean | nucleus | 33.48 | 29.06 |
| KRH04135 | Soybean | nucleus | 32.61 | 28.52 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 36.09 | 28.23 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 38.26 | 28.03 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 35.65 | 27.89 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 33.48 | 27.8 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 37.83 | 27.62 |
| KRH28087 | Soybean | nucleus | 34.35 | 27.43 |
| TraesCS2B01G431800.1 | Wheat | nucleus | 36.52 | 27.18 |
| HORVU6Hr1G063280.1 | Barley | mitochondrion, nucleus, plastid | 36.96 | 27.16 |
| HORVU0Hr1G030680.1 | Barley | nucleus | 36.96 | 27.16 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 36.96 | 27.07 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 36.09 | 27.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 43.04 | 26.83 |
| Zm00001d002731_P001 | Maize | nucleus | 35.22 | 26.38 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 31.3 | 26.37 |
| KRH77360 | Soybean | nucleus | 33.91 | 26.17 |
| GSMUA_Achr5P13370_001 | Banana | mitochondrion, nucleus | 33.48 | 26.01 |
| GSMUA_Achr1P01550_001 | Banana | nucleus | 33.04 | 25.85 |
| Os02t0659500-01 | Rice | mitochondrion | 36.96 | 24.93 |
| GSMUA_Achr6P34890_001 | Banana | nucleus, plastid | 29.13 | 24.72 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 34.35 | 24.46 |
| PGSC0003DMT400012154 | Potato | nucleus | 31.3 | 24.16 |
| Solyc08g078590.1.1 | Tomato | nucleus | 29.13 | 23.84 |
| OQU85696 | Sorghum | mitochondrion | 34.78 | 23.74 |
| EES11238 | Sorghum | mitochondrion | 34.35 | 23.72 |
| GSMUA_Achr9P09370_001 | Banana | nucleus | 27.83 | 23.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.61 | 22.81 |
| Zm00001d051371_P001 | Maize | mitochondrion | 33.48 | 22.71 |
| Solyc06g060740.1.1 | Tomato | nucleus | 29.57 | 22.22 |
| CDY40527 | Canola | nucleus | 18.7 | 22.16 |
| GSMUA_Achr4P03310_001 | Banana | nucleus | 24.78 | 22.09 |
| PGSC0003DMT400030986 | Potato | nucleus | 29.13 | 21.97 |
| CDY09671 | Canola | nucleus | 18.7 | 21.5 |
| CDY32274 | Canola | nucleus | 18.26 | 21.32 |
| AT4G16610.1 | Thale cress | nucleus | 18.7 | 21.08 |
| Bra040741.1-P | Field mustard | nucleus | 19.13 | 21.05 |
| CDY50848 | Canola | nucleus | 19.13 | 21.05 |
| CDY53641 | Canola | nucleus | 19.13 | 21.05 |
| GSMUA_Achr4P28230_001 | Banana | nucleus | 19.57 | 21.03 |
| KRH39952 | Soybean | nucleus | 27.83 | 20.91 |
| Zm00001d017497_P001 | Maize | mitochondrion | 28.7 | 20.89 |
| CDY69391 | Canola | nucleus | 19.13 | 20.56 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 19.13 | 20.18 |
| GSMUA_Achr5P01720_001 | Banana | nucleus | 20.0 | 20.18 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 18.7 | 20.09 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 29.13 | 18.56 |
| GSMUA_Achr4P32760_001 | Banana | nucleus | 26.09 | 18.35 |
| GSMUA_Achr2P13410_001 | Banana | nucleus | 19.13 | 18.11 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 19.13 | 17.81 |
| GSMUA_Achr9P26580_001 | Banana | nucleus | 14.78 | 16.27 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 19.13 | 15.94 |
| Bra038491.1-P | Field mustard | nucleus | 23.48 | 13.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P05560_001 | EnsemblPlants:GSMUA_Achr4T05560_001 | EnsemblPlantsGene:GSMUA_Achr4G05560_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF304 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000295C5BB |
| UniProt:M0SLC3 | MapMan:35.2 | : | : | : | : |
Description
Putative Zinc finger protein 358 [Source:GMGC_GENE;Acc:GSMUA_Achr4G05560_001]
Coordinates
chr4:-:4286827..4287918
Molecular Weight (calculated)
25682.1 Da
IEP (calculated)
11.253
GRAVY (calculated)
-0.882
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MERHRCKRCY RRFAHGRALA GHMRSHHVVP VRFPCPLPSP SVASSSSPDR ESDTESFLHR WPKRRRSDGI GSSSRRRRSR FRCGTCRKDF SGASAAHHDA
101: KLWRCPYCYR VFGSGQALGG HKRTHLSSAV ATSPAPHLPH PPSPFAAAHR NNGGRDLNLP APLEEEAELS QQSSHASDFL SPIRSPSETK KTPFWRQFES
201: NPKARGSTKL HSRSLLFEAS IGNEDSIPSS
101: KLWRCPYCYR VFGSGQALGG HKRTHLSSAV ATSPAPHLPH PPSPFAAAHR NNGGRDLNLP APLEEEAELS QQSSHASDFL SPIRSPSETK KTPFWRQFES
201: NPKARGSTKL HSRSLLFEAS IGNEDSIPSS
001: MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
Arabidopsis Description
ZAT1Zinc finger protein ZAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q39092]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.