Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G410300.1 | Wheat | nucleus | 92.23 | 92.83 |
| TraesCS2A01G413100.1 | Wheat | nucleus | 84.47 | 88.78 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 82.85 | 87.07 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 51.46 | 72.94 |
| Zm00001d002731_P001 | Maize | nucleus | 68.28 | 68.73 |
| EES11238 | Sorghum | mitochondrion | 73.79 | 68.47 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 62.78 | 61.78 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 30.74 | 48.72 |
| KRH57408 | Soybean | nucleus | 33.33 | 38.87 |
| KRH04135 | Soybean | nucleus | 32.36 | 38.02 |
| KRH28087 | Soybean | nucleus | 34.63 | 37.15 |
| TraesCS1B01G225500.1 | Wheat | nucleus | 40.78 | 36.95 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 27.18 | 36.52 |
| KRH77360 | Soybean | nucleus | 34.95 | 36.24 |
| CDY09671 | Canola | nucleus | 22.65 | 35.0 |
| CDY40527 | Canola | nucleus | 21.36 | 34.02 |
| CDY32274 | Canola | nucleus | 21.68 | 34.01 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 35.28 | 33.75 |
| AT4G16610.1 | Thale cress | nucleus | 22.01 | 33.33 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 22.65 | 32.71 |
| CDY69391 | Canola | nucleus | 22.65 | 32.71 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 28.16 | 32.71 |
| CDY50848 | Canola | nucleus | 22.01 | 32.54 |
| CDY53641 | Canola | nucleus | 22.01 | 32.54 |
| Bra040741.1-P | Field mustard | nucleus | 22.01 | 32.54 |
| PGSC0003DMT400030986 | Potato | nucleus | 29.77 | 30.16 |
| Solyc06g060740.1.1 | Tomato | nucleus | 29.77 | 30.07 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 20.71 | 29.09 |
| PGSC0003DMT400012154 | Potato | nucleus | 27.83 | 28.86 |
| KRH39952 | Soybean | nucleus | 28.48 | 28.76 |
| Solyc08g078590.1.1 | Tomato | nucleus | 25.24 | 27.76 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 31.72 | 26.56 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 20.39 | 26.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.09 | 25.88 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 18.12 | 25.45 |
| TraesCS2B01G105900.1 | Wheat | nucleus | 16.18 | 25.0 |
| TraesCS7B01G065700.1 | Wheat | nucleus | 17.15 | 24.88 |
| TraesCS5B01G406000.1 | Wheat | nucleus | 17.15 | 20.31 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 19.42 | 16.62 |
| Bra038491.1-P | Field mustard | nucleus | 20.71 | 16.45 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G431800.1 | EnsemblPlantsGene:TraesCS2B01G431800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF323 | PFAM:PF13894 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr2B:-:620860782..620861711
Molecular Weight (calculated)
32615.3 Da
IEP (calculated)
7.867
GRAVY (calculated)
-0.491
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNTCKLCC RRFASPRALA GHMRSHSIKV ARSQISSASS ASTSVAAGDD DAAADARMMP IQAYVLRGKP KRRVRLAESD FSDRESEADY PSQSPDAKRV
101: HGGSRDAEPV SSVSDAATPE EDVALSLMML SRDSWPAAAW QPSSYRAADS DDGSDGGGEV EPRAAEQKRT RFQCPACKKV FRSYQALGGH RASHVRGGRG
201: GCCAPPLNPP PPPPASTHLQ PLLECEEGTK PHPHECPCCF RVFASGQALG GHKRSQLCPG AAAVAAPGAD HPAAAMKSLG LIDLNLPAPF EDLEVSAVSD
301: PFLSARPGH
101: HGGSRDAEPV SSVSDAATPE EDVALSLMML SRDSWPAAAW QPSSYRAADS DDGSDGGGEV EPRAAEQKRT RFQCPACKKV FRSYQALGGH RASHVRGGRG
201: GCCAPPLNPP PPPPASTHLQ PLLECEEGTK PHPHECPCCF RVFASGQALG GHKRSQLCPG AAAVAAPGAD HPAAAMKSLG LIDLNLPAPF EDLEVSAVSD
301: PFLSARPGH
001: MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
Arabidopsis Description
ZAT1Zinc finger protein ZAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q39092]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.