Factsheet for Zm00001d021990_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021992_P001	Maize	nucleus	100.0	100.0
OQU90180	Sorghum	nucleus, plastid	73.06	66.95
TraesCS2D01G193900.1	Wheat	nucleus	53.88	54.13
TraesCS2A01G193900.1	Wheat	nucleus	53.42	53.18
TraesCS2B01G212900.1	Wheat	nucleus	53.42	53.18
Zm00001d020427_P001	Maize	nucleus	26.48	47.93
Zm00001d012094_P001	Maize	nucleus	30.14	47.83
Zm00001d043882_P001	Maize	nucleus	45.66	42.55
Zm00001d006735_P001	Maize	nucleus	36.53	41.03
Zm00001d006736_P001	Maize	mitochondrion, nucleus, plastid	37.44	34.31
Zm00001d029584_P001	Maize	nucleus	23.29	28.65
Zm00001d047330_P001	Maize	nucleus	24.2	28.04
Zm00001d047334_P001	Maize	nucleus	28.77	28.0
Zm00001d029589_P001	Maize	nucleus	26.48	27.62
Zm00001d022002_P001	Maize	nucleus	24.66	27.27
Zm00001d029586_P001	Maize	nucleus	28.77	27.04
Zm00001d043884_P001	Maize	nucleus	23.74	26.4
Zm00001d029587_P001	Maize	nucleus	29.22	25.81
Zm00001d013208_P001	Maize	nucleus	31.05	25.76
Zm00001d034145_P001	Maize	nucleus	32.42	25.54
Zm00001d030858_P001	Maize	nucleus	31.96	25.27
Zm00001d017695_P001	Maize	extracellular	14.61	23.02
Zm00001d002731_P001	Maize	nucleus	28.77	20.52
Zm00001d047102_P001	Maize	nucleus	27.85	17.94
Zm00001d029917_P001	Maize	nucleus	26.94	17.3
Zm00001d017497_P001	Maize	mitochondrion	20.09	13.92
Zm00001d051371_P001	Maize	mitochondrion	21.46	13.86

Protein Annotations

EntrezGene:100281848	MapMan:15.5.15	EMBL:BT070151	UniProt:C0PPD2	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	ProteinID:ONM59222.1	ProteinID:ONM59225.1	PFAM:PF13912	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF328	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000195D5BB
EnsemblPlantsGene:Zm00001d021990	EnsemblPlants:Zm00001d021990_P001	EnsemblPlants:Zm00001d021990_T001	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

Zinc finger protein AZF1

Coordinates

chr7:+:167623666..167624325

Molecular Weight (calculated)

22525.5 Da

IEP (calculated)

8.812

GRAVY (calculated)

-0.552

Length

219 amino acids

Sequence
(BLAST)

001: MALDAALDVC SKTPSPSPPT VDSSARGGRR SKRRAGSPAS DGGGGVDGND QPEQEEYLAQ CLLMLSHGLP GDGAAPPSAA AKAKAIQQQH QHGRYECSVC
101: GKVYTSYQAL GGHKTSHRKP PVVAPAPAPA PGGEADASLS GGTAHAAAEK EKTHRCSVCK RTFQSGQALG GHKRLHYEAK AKDADAVAAT AVLQNLDLNL
201: PAEGAPPEPK RARTMLLLA

Best Arabidopsis Sequence Match ( AT3G49930.1 )
(BLAST)

001: MALDTLNSPT STTTTTAPPP FLRCLDETEP ENLESWTKRK RTKRHRIDQP NPPPSEEEYL ALCLLMLARG SSDHHSPPSD HHSLSPLSDH QKDYKCSVCG
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL

Arabidopsis Description

At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.