Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006735_P001 | Maize | nucleus | 76.03 | 47.18 |
| Zm00001d012094_P001 | Maize | nucleus | 53.72 | 47.1 |
| Zm00001d006736_P001 | Maize | mitochondrion, nucleus, plastid | 85.12 | 43.1 |
| Zm00001d043882_P001 | Maize | nucleus | 66.94 | 34.47 |
| TraesCS2D01G193900.1 | Wheat | nucleus | 48.76 | 27.06 |
| Zm00001d021990_P001 | Maize | nucleus | 47.93 | 26.48 |
| Zm00001d021992_P001 | Maize | nucleus | 47.93 | 26.48 |
| TraesCS2A01G193900.1 | Wheat | nucleus | 47.93 | 26.36 |
| OQU90180 | Sorghum | nucleus, plastid | 51.24 | 25.94 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 46.28 | 25.45 |
| Zm00001d043884_P001 | Maize | nucleus | 36.36 | 22.34 |
| Zm00001d029584_P001 | Maize | nucleus | 31.41 | 21.35 |
| Zm00001d047330_P001 | Maize | nucleus | 32.23 | 20.63 |
| Zm00001d022002_P001 | Maize | nucleus | 30.58 | 18.69 |
| Zm00001d029586_P001 | Maize | nucleus | 35.54 | 18.45 |
| Zm00001d029589_P001 | Maize | nucleus | 30.58 | 17.62 |
| Zm00001d047334_P001 | Maize | nucleus | 32.23 | 17.33 |
| Zm00001d034145_P001 | Maize | nucleus | 37.19 | 16.19 |
| Zm00001d029587_P001 | Maize | nucleus | 33.06 | 16.13 |
| Zm00001d017695_P001 | Maize | extracellular | 18.18 | 15.83 |
| Zm00001d013208_P001 | Maize | nucleus | 33.88 | 15.53 |
| Zm00001d030858_P001 | Maize | nucleus | 31.41 | 13.72 |
| Zm00001d002731_P001 | Maize | nucleus | 28.1 | 11.07 |
| Zm00001d047102_P001 | Maize | nucleus | 29.75 | 10.59 |
| Zm00001d051371_P001 | Maize | mitochondrion | 28.93 | 10.32 |
| Zm00001d029917_P001 | Maize | nucleus | 26.45 | 9.38 |
| Zm00001d017497_P001 | Maize | mitochondrion | 19.01 | 7.28 |
Protein Annotations
| EnsemblPlants:Zm00001d020427_P001 | EnsemblPlants:Zm00001d020427_T001 | EnsemblPlantsGene:Zm00001d020427 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF328 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:ONM54919.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0002220403 | UniProt:A0A1D6I452 | MapMan:15.5.15 | : | : |
Description
Zinc finger protein AZF1
Coordinates
chr7:+:113262694..113263059
Molecular Weight (calculated)
12846.0 Da
IEP (calculated)
6.774
GRAVY (calculated)
-0.680
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPTSANMAD GYKCSVCEKV FTSYQALGGH KTSHRKPPAA AAPSDKASSS GTAHEKLHQC SLCPRTFSSG QMLGEHMTSH RKPSPPVMVR DFDLNMPSEA
101: EPEAAPPDVK RACTDDDVAG D
101: EPEAAPPDVK RACTDDDVAG D
001: MALDTLNSPT STTTTTAPPP FLRCLDETEP ENLESWTKRK RTKRHRIDQP NPPPSEEEYL ALCLLMLARG SSDHHSPPSD HHSLSPLSDH QKDYKCSVCG
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
Arabidopsis Description
At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.