Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047330_P001 | Maize | nucleus | 78.65 | 74.07 |
| EER92089 | Sorghum | nucleus | 85.96 | 73.91 |
| TraesCS2A01G090200.1 | Wheat | nucleus | 66.29 | 60.2 |
| TraesCS2D01G088100.1 | Wheat | nucleus | 65.17 | 59.18 |
| TraesCS2B01G105900.1 | Wheat | nucleus | 65.73 | 58.5 |
| Os03t0437100-01 | Rice | nucleus | 64.04 | 57.0 |
| Os11t0340477-01 | Rice | nucleus | 64.04 | 57.0 |
| HORVU2Hr1G014870.1 | Barley | nucleus | 64.61 | 53.24 |
| HORVU3Hr1G028100.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 48.88 | 43.72 |
| Zm00001d022002_P001 | Maize | nucleus | 48.31 | 43.43 |
| Zm00001d029589_P001 | Maize | nucleus | 51.12 | 43.33 |
| Zm00001d047334_P001 | Maize | nucleus | 51.69 | 40.89 |
| Zm00001d029586_P001 | Maize | nucleus | 52.81 | 40.34 |
| Zm00001d029587_P001 | Maize | nucleus | 55.62 | 39.92 |
| Zm00001d020427_P001 | Maize | nucleus | 21.35 | 31.41 |
| Zm00001d017695_P001 | Maize | extracellular | 23.6 | 30.22 |
| Zm00001d012094_P001 | Maize | nucleus | 20.22 | 26.09 |
| Zm00001d043884_P001 | Maize | nucleus | 27.53 | 24.87 |
| Zm00001d034145_P001 | Maize | nucleus | 38.76 | 24.82 |
| Zm00001d030858_P001 | Maize | nucleus | 37.64 | 24.19 |
| Zm00001d013208_P001 | Maize | nucleus | 35.39 | 23.86 |
| Zm00001d021990_P001 | Maize | nucleus | 28.65 | 23.29 |
| Zm00001d021992_P001 | Maize | nucleus | 28.65 | 23.29 |
| Zm00001d006735_P001 | Maize | nucleus | 23.6 | 21.54 |
| Zm00001d043882_P001 | Maize | nucleus | 25.84 | 19.57 |
| Zm00001d006736_P001 | Maize | mitochondrion, nucleus, plastid | 24.72 | 18.41 |
| CDY70162 | Canola | nucleus | 21.35 | 17.76 |
| Bra029315.1-P | Field mustard | nucleus | 21.35 | 16.31 |
| CDY42873 | Canola | nucleus | 21.91 | 15.66 |
| Zm00001d002731_P001 | Maize | nucleus | 24.72 | 14.33 |
| Bra012953.1-P | Field mustard | plastid | 20.79 | 13.45 |
| Zm00001d051371_P001 | Maize | mitochondrion | 25.28 | 13.27 |
| CDY02142 | Canola | nucleus | 20.22 | 13.24 |
| CDY23066 | Canola | plastid | 20.22 | 13.09 |
| Zm00001d047102_P001 | Maize | nucleus | 23.6 | 12.35 |
| AT5G61470.1 | Thale cress | nucleus | 19.66 | 11.51 |
| Zm00001d029917_P001 | Maize | nucleus | 21.91 | 11.44 |
| Zm00001d017497_P001 | Maize | mitochondrion | 19.66 | 11.08 |
Protein Annotations
| EntrezGene:103636710 | MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:A0A1D6K643 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | ProteinID:ONL99041.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF178 | SMART:SM00355 | SUPFAM:SSF57667 | SignalP:SignalP-noTM | UniParc:UPI0001B376BB |
| EnsemblPlantsGene:Zm00001d029584 | EnsemblPlants:Zm00001d029584_P001 | EnsemblPlants:Zm00001d029584_T001 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
Zinc finger protein AZF2
Coordinates
chr1:-:77937670..77938206
Molecular Weight (calculated)
18652.0 Da
IEP (calculated)
8.788
GRAVY (calculated)
-0.325
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTHDDCVS LCLMALAAAG GGGMTTQSYA PSTAAWTTQE CELRFRCSVC GKAFASHQAL GGHKASHRKP THLQTQQASS SSVTTSSAGS GGGQGRHRCS
101: VCHRSFATGQ ALGGHKRCHY WDGLSVSLTA SGSGSTVKGF DLNLMPATRW GEEEEVQSPL PIKKRRLSGP SLDLSLTI
101: VCHRSFATGQ ALGGHKRCHY WDGLSVSLTA SGSGSTVKGF DLNLMPATRW GEEEEVQSPL PIKKRRLSGP SLDLSLTI
001: MALETLTSPR LSSPMPTLFQ DSALGFHGSK GKRSKRSRSE FDRQSLTEDE YIALCLMLLA RDGDRNRDLD LPSSSSSPPL LPPLPTPIYK CSVCDKAFSS
101: YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR
201: GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP
101: YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR
201: GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP
Arabidopsis Description
ZAT6Zinc finger protein ZAT6 [Source:UniProtKB/Swiss-Prot;Acc:O22533]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.