Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020427_P001 | Maize | nucleus | 47.18 | 76.03 |
| Zm00001d012094_P001 | Maize | nucleus | 49.74 | 70.29 |
| Zm00001d006736_P001 | Maize | mitochondrion, nucleus, plastid | 64.1 | 52.3 |
| Zm00001d043882_P001 | Maize | nucleus | 58.97 | 48.94 |
| OQU90180 | Sorghum | nucleus, plastid | 46.67 | 38.08 |
| Zm00001d021990_P001 | Maize | nucleus | 41.03 | 36.53 |
| Zm00001d021992_P001 | Maize | nucleus | 41.03 | 36.53 |
| TraesCS2D01G193900.1 | Wheat | nucleus | 37.95 | 33.95 |
| TraesCS2A01G193900.1 | Wheat | nucleus | 37.44 | 33.18 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 36.41 | 32.27 |
| Zm00001d043884_P001 | Maize | nucleus | 27.18 | 26.9 |
| Zm00001d047330_P001 | Maize | nucleus | 23.59 | 24.34 |
| Zm00001d029589_P001 | Maize | nucleus | 25.64 | 23.81 |
| Zm00001d029584_P001 | Maize | nucleus | 21.54 | 23.6 |
| Zm00001d022002_P001 | Maize | nucleus | 22.56 | 22.22 |
| Zm00001d029586_P001 | Maize | nucleus | 25.64 | 21.46 |
| Zm00001d047334_P001 | Maize | nucleus | 24.62 | 21.33 |
| Zm00001d029587_P001 | Maize | nucleus | 26.67 | 20.97 |
| Zm00001d034145_P001 | Maize | nucleus | 29.23 | 20.5 |
| Zm00001d013208_P001 | Maize | nucleus | 25.13 | 18.56 |
| Zm00001d017695_P001 | Maize | extracellular | 12.82 | 17.99 |
| Zm00001d030858_P001 | Maize | nucleus | 24.1 | 16.97 |
| Zm00001d002731_P001 | Maize | nucleus | 24.1 | 15.31 |
| Zm00001d047102_P001 | Maize | nucleus | 24.1 | 13.82 |
| Zm00001d029917_P001 | Maize | nucleus | 23.08 | 13.2 |
| Zm00001d051371_P001 | Maize | mitochondrion | 21.03 | 12.09 |
| Zm00001d017497_P001 | Maize | mitochondrion | 15.9 | 9.81 |
Protein Annotations
| EnsemblPlants:Zm00001d006735_P001 | EnsemblPlants:Zm00001d006735_T001 | EnsemblPlantsGene:Zm00001d006735 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF328 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:ONM24891.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0008449BC3 | UniProt:A0A1D6F041 | MapMan:15.5.15 | : | : |
Description
Zinc finger protein AZF1
Coordinates
chr2:+:215487550..215492303
Molecular Weight (calculated)
20867.8 Da
IEP (calculated)
8.236
GRAVY (calculated)
-0.446
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTKPDNQA EWEYLTSCLI MLSRGLRDGD AANATRAVGA APTSAKMADG YKYKCTLCDK VFASYQALGG HKTRHRKPPA AAAPSDGASS SSTAHEKLHQ
101: CSLCSRTFSS GQALGGHMTS HRKPPPPVVV LDFDLNMPAE AEPESRPRRR MPSGHAQTTM LLVTDPPVVP TAAGSWLRHF DLNLPAEAEG AMPET
101: CSLCSRTFSS GQALGGHMTS HRKPPPPVVV LDFDLNMPAE AEPESRPRRR MPSGHAQTTM LLVTDPPVVP TAAGSWLRHF DLNLPAEAEG AMPET
001: MALDTLNSPT STTTTTAPPP FLRCLDETEP ENLESWTKRK RTKRHRIDQP NPPPSEEEYL ALCLLMLARG SSDHHSPPSD HHSLSPLSDH QKDYKCSVCG
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
Arabidopsis Description
At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.