Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G193900.1 | Wheat | nucleus | 95.41 | 94.55 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 94.95 | 94.09 |
| OQU90180 | Sorghum | nucleus, plastid | 64.22 | 58.58 |
| Zm00001d021992_P001 | Maize | nucleus | 54.13 | 53.88 |
| Zm00001d021990_P001 | Maize | nucleus | 54.13 | 53.88 |
| Zm00001d020427_P001 | Maize | nucleus | 27.06 | 48.76 |
| Zm00001d012094_P001 | Maize | nucleus | 27.06 | 42.75 |
| Zm00001d043882_P001 | Maize | nucleus | 43.12 | 40.0 |
| Zm00001d006735_P001 | Maize | nucleus | 33.95 | 37.95 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 38.07 | 37.9 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 40.37 | 36.97 |
| Zm00001d006736_P001 | Maize | mitochondrion, nucleus, plastid | 35.78 | 32.64 |
| TraesCS7D01G161800.1 | Wheat | nucleus | 29.36 | 30.77 |
| Zm00001d043884_P001 | Maize | nucleus | 27.06 | 29.95 |
| TraesCS2D01G088100.1 | Wheat | nucleus | 26.61 | 29.59 |
| TraesCS5D01G411400.1 | Wheat | nucleus | 37.16 | 24.32 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 25.69 | 18.24 |
| TraesCS1D01G214900.1 | Wheat | nucleus | 27.52 | 17.6 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 23.85 | 16.51 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G193900.1 | EnsemblPlantsGene:TraesCS2D01G193900 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF328 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr2D:+:138907711..138908367
Molecular Weight (calculated)
22136.0 Da
IEP (calculated)
9.198
GRAVY (calculated)
-0.512
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDDVSRKS PVPPPSPPPM DSWARGGRRS RRRGSSGSAS SGGGVESEEE YLALSLLMLS RGVRGEVEDG GIGGVKGLGA APTKAQGYGC SVCGKVYASY
101: QALGGHKTSH RKPPTPPAAS AGGDEASGGA PVEAKVHQCS LCHRTFPSGQ ALGGHKRLHY EGGAAADGTG KDKEAAKAKA AALLRDFDLN LPASGVAGDE
201: AESPPPEAKR ARLMLLAV
101: QALGGHKTSH RKPPTPPAAS AGGDEASGGA PVEAKVHQCS LCHRTFPSGQ ALGGHKRLHY EGGAAADGTG KDKEAAKAKA AALLRDFDLN LPASGVAGDE
201: AESPPPEAKR ARLMLLAV
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.