Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400085102 | Potato | nucleus | 85.64 | 74.22 |
| PGSC0003DMT400095976 | Potato | nucleus | 88.72 | 72.69 |
| PGSC0003DMT400040388 | Potato | cytosol | 77.44 | 71.23 |
| PGSC0003DMT400072661 | Potato | nucleus | 85.13 | 64.09 |
| PGSC0003DMT400055391 | Potato | nucleus | 59.49 | 60.1 |
| PGSC0003DMT400006126 | Potato | nucleus | 86.67 | 58.68 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 66.67 | 56.28 |
| Solyc04g077980.1.1 | Tomato | nucleus, plastid | 64.62 | 48.46 |
| PGSC0003DMT400091896 | Potato | nucleus | 38.97 | 40.0 |
| PGSC0003DMT400030168 | Potato | nucleus | 35.9 | 33.49 |
| KRH15443 | Soybean | nucleus | 34.36 | 28.76 |
| KRH05601 | Soybean | nucleus | 34.36 | 27.92 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 27.18 | 25.98 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 26.15 | 23.29 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 26.15 | 23.18 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 25.64 | 22.83 |
| Os12t0583700-00 | Rice | nucleus | 28.21 | 22.27 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 27.18 | 22.18 |
| PGSC0003DMT400084751 | Potato | nucleus | 29.74 | 22.14 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 26.67 | 21.85 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 26.67 | 21.58 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 26.15 | 20.65 |
| Os03t0610400-01 | Rice | nucleus | 23.59 | 19.33 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 25.64 | 18.12 |
| Zm00001d030858_P001 | Maize | nucleus | 25.64 | 18.05 |
| PGSC0003DMT400053945 | Potato | cytosol | 13.85 | 17.65 |
| EES16240 | Sorghum | nucleus | 23.59 | 15.86 |
| PGSC0003DMT400066939 | Potato | nucleus | 18.97 | 11.21 |
| PGSC0003DMT400030986 | Potato | nucleus | 16.41 | 10.49 |
| PGSC0003DMT400012154 | Potato | nucleus | 15.38 | 10.07 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400024799 | EnsemblPlantsGene:PGSC0003DMG400009587 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 | PFscan:PS50157 |
| PGSC:PGSC0003DMG400009587 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI00029480EF | UniProt:M1AKM5 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Zinc finger protein PIF1 [Source:PGSC_GENE;Acc:PGSC0003DMG400009587]
Coordinates
chr10:+:40612708..40613536
Molecular Weight (calculated)
21319.2 Da
IEP (calculated)
4.973
GRAVY (calculated)
-0.543
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRQSTEEEY LALCLIMLAR SDGSVSQVRS LPPSVLVMKI HTPLKKIEEK MLYKCSVCGK GFGSYQALGG HKASHQKLIA GGGEGDDQST TSTTTNATGT
101: TSSGNGNGSG RTHEFTSEED MGSTISHPDF DLNIPVLPKF YPGFGSGEDE REMSRVGVEL MEIEKEVTEE MRDGDDEVKR ILPWTKQITV RGIVR
101: TSSGNGNGSG RTHEFTSEED MGSTISHPDF DLNIPVLPKF YPGFGSGEDE REMSRVGVEL MEIEKEVTEE MRDGDDEVKR ILPWTKQITV RGIVR
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.