Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091896 | Potato | nucleus | 78.47 | 86.32 |
| PGSC0003DMT400055391 | Potato | nucleus | 46.41 | 50.26 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 50.72 | 45.89 |
| PGSC0003DMT400072661 | Potato | nucleus | 55.5 | 44.79 |
| KRH15443 | Soybean | nucleus | 49.76 | 44.64 |
| KRH05601 | Soybean | nucleus | 51.2 | 44.58 |
| PGSC0003DMT400006126 | Potato | nucleus | 56.94 | 41.32 |
| PGSC0003DMT400040388 | Potato | cytosol | 41.15 | 40.57 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 39.23 | 40.2 |
| PGSC0003DMT400085102 | Potato | nucleus | 42.58 | 39.56 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 41.15 | 39.27 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 41.15 | 39.27 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 41.15 | 39.09 |
| PGSC0003DMT400084751 | Potato | nucleus | 48.33 | 38.55 |
| PGSC0003DMT400095976 | Potato | nucleus | 43.54 | 38.24 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 43.06 | 37.66 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 42.58 | 37.4 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 42.58 | 36.93 |
| PGSC0003DMT400024799 | Potato | cytosol | 33.49 | 35.9 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 41.63 | 35.22 |
| Os12t0583700-00 | Rice | nucleus | 41.63 | 35.22 |
| Os03t0610400-01 | Rice | nucleus | 39.23 | 34.45 |
| EES16240 | Sorghum | nucleus | 39.71 | 28.62 |
| Zm00001d030858_P001 | Maize | nucleus | 37.8 | 28.52 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 37.32 | 28.26 |
| PGSC0003DMT400053945 | Potato | cytosol | 19.62 | 26.8 |
| PGSC0003DMT400066939 | Potato | nucleus | 32.54 | 20.61 |
| PGSC0003DMT400012154 | Potato | nucleus | 28.71 | 20.13 |
| PGSC0003DMT400030986 | Potato | nucleus | 28.71 | 19.67 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400030168 | EnsemblPlantsGene:PGSC0003DMG400011548 | EntrezGene:102589620 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | PGSC:PGSC0003DMG400011548 | RefSeq:XP_006342662.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000295E2D9 | UniProt:M1ATU2 | MapMan:15.5.15 | : |
Description
Zinc finger DNA-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011548]
Coordinates
chr12:+:56261501..56262344
Molecular Weight (calculated)
23231.2 Da
IEP (calculated)
8.793
GRAVY (calculated)
-0.628
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALNSPT TTTPPSLFQF QINTTTQNYL ESWTKSKIRS KRPRSIVMEE QQPIISEDEY LALCLLMLAH SNNNNNNNIT SKNSYKCSVC GKCFGSYQAL
101: GGHKASHRSN RDKVYEQSVV ITSGNAVSGW THECSICHKT FPTGQALGGH KRRHYEGKVT SSSSSLNGVG SVNNFDLNLP ALPEYWSGFR SGEDEVESPH
201: PAKKLRQLF
101: GGHKASHRSN RDKVYEQSVV ITSGNAVSGW THECSICHKT FPTGQALGGH KRRHYEGKVT SSSSSLNGVG SVNNFDLNLP ALPEYWSGFR SGEDEVESPH
201: PAKKLRQLF
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.