Factsheet for Bra001752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82290	Canola	nucleus	98.13	97.4
Bra038219.1-P	Field mustard	nucleus	81.27	82.2
Bra022436.1-P	Field mustard	nucleus	78.65	78.65
AT3G19580.1	Thale cress	nucleus	79.03	77.29
Bra033666.1-P	Field mustard	nucleus	36.7	52.97
Bra032845.1-P	Field mustard	nucleus	39.7	46.29
Bra010922.1-P	Field mustard	nucleus	40.07	45.92
TraesCS4A01G236000.1	Wheat	nucleus	34.08	44.61
HORVU4Hr1G013460.1	Barley	nucleus	35.96	43.84
Bra029985.1-P	Field mustard	nucleus	35.58	42.99
TraesCS4D01G077900.1	Wheat	nucleus	35.21	42.92
TraesCS4B01G079000.1	Wheat	nucleus	35.21	42.73
Bra012914.1-P	Field mustard	nucleus	33.71	42.25
Bra009464.1-P	Field mustard	plastid	35.96	42.11
TraesCS5B01G076400.1	Wheat	nucleus	36.33	40.59
Bra037845.1-P	Field mustard	nucleus	34.83	40.26
TraesCS5A01G070600.1	Wheat	nucleus	36.33	40.25
Bra031834.1-P	Field mustard	nucleus	35.21	40.0
TraesCS5D01G082700.1	Wheat	nucleus	35.58	39.92
Os12t0583700-00	Rice	nucleus	36.7	39.68
Bra024448.1-P	Field mustard	nucleus	35.21	39.0
Os03t0610400-01	Rice	nucleus	34.46	38.66
GSMUA_Achr5P08730_001	Banana	nucleus	34.46	37.25
GSMUA_Achr6P24730_001	Banana	nucleus	32.96	31.88
Zm00001d030858_P001	Maize	nucleus	30.71	29.6
EES16240	Sorghum	nucleus	31.84	29.31
Bra014483.1-P	Field mustard	nucleus	24.72	25.88
Bra007545.1-P	Field mustard	nucleus	28.09	25.25
Bra040325.1-P	Field mustard	nucleus	26.22	24.91
Bra003422.1-P	Field mustard	nucleus	26.59	23.91
Bra000372.1-P	Field mustard	mitochondrion, nucleus	26.59	22.9
Bra018817.1-P	Field mustard	nucleus	30.34	21.72
Bra012953.1-P	Field mustard	plastid	18.35	17.82
Bra040741.1-P	Field mustard	nucleus	13.86	17.7
Bra029315.1-P	Field mustard	nucleus	14.98	17.17
Bra012701.1-P	Field mustard	nucleus, plastid	13.11	16.36
Bra038491.1-P	Field mustard	nucleus	14.23	9.77

Protein Annotations

EnsemblPlants:Bra001752.1	EnsemblPlants:Bra001752.1-P	EnsemblPlantsGene:Bra001752	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF263
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI00025404FB	UniProt:M4CC22	MapMan:15.5.15	:	:	:

Description

AT3G19580 (E=7e-078) AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding

Coordinates

chrA03:-:18247425..18248228

Molecular Weight (calculated)

29038.6 Da

IEP (calculated)

9.488

GRAVY (calculated)

-0.592

Length

267 amino acids

Sequence
(BLAST)

001: MALEAMNSPT TTSPFTVRKD RIGATDDLMN DAVFLEPWLK RKRSKRQRSP SPSSSTPPRL HAKSQSQDPS EEEYLALCLL MLAKDQPRTR FQPSPPPPPQ
101: ERTTKLSYNC SVCGKAFLSY QALGGHKASH RIKPPTAGDS TAPSIAGEKH PTSTTIAPSG KIHECSICHK VFPTGQALGG HKRCHYEGNL GGGSKSVSHS
201: GSVSSTVSEE RSNRVIIDLN LPALPELSLH HDPVVDDEIL SPLTGKKPLL LTGRDQVIKK EDLSLRI

Best Arabidopsis Sequence Match ( AT3G19580.2 )
(BLAST)

001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI

Arabidopsis Description

AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.