Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY08718 | Canola | nucleus | 97.1 | 97.1 |
CDY36493 | Canola | nucleus | 93.36 | 93.36 |
Bra037845.1-P | Field mustard | nucleus | 80.08 | 83.55 |
Bra031834.1-P | Field mustard | nucleus | 80.91 | 82.98 |
AT5G67450.1 | Thale cress | nucleus | 80.5 | 79.18 |
Bra012914.1-P | Field mustard | nucleus | 53.53 | 60.56 |
Bra029985.1-P | Field mustard | nucleus | 54.36 | 59.28 |
Bra033666.1-P | Field mustard | nucleus | 34.44 | 44.86 |
VIT_07s0129g00240.t01 | Wine grape | nucleus | 42.74 | 44.21 |
TraesCS4A01G236000.1 | Wheat | nucleus | 33.2 | 39.22 |
Bra010922.1-P | Field mustard | nucleus | 37.76 | 39.06 |
Bra032845.1-P | Field mustard | nucleus | 36.51 | 38.43 |
Bra009464.1-P | Field mustard | plastid | 36.1 | 38.16 |
TraesCS4B01G079000.1 | Wheat | nucleus | 34.02 | 37.27 |
TraesCS4D01G077900.1 | Wheat | nucleus | 33.2 | 36.53 |
HORVU4Hr1G013460.1 | Barley | nucleus | 33.2 | 36.53 |
TraesCS5B01G076400.1 | Wheat | nucleus | 35.27 | 35.56 |
Bra038219.1-P | Field mustard | nucleus | 38.59 | 35.23 |
Bra001752.1-P | Field mustard | nucleus | 39.0 | 35.21 |
TraesCS5A01G070600.1 | Wheat | nucleus | 34.85 | 34.85 |
Bra022436.1-P | Field mustard | nucleus | 38.59 | 34.83 |
Os03t0610400-01 | Rice | nucleus | 34.02 | 34.45 |
TraesCS5D01G082700.1 | Wheat | nucleus | 34.02 | 34.45 |
Os12t0583700-00 | Rice | nucleus | 32.37 | 31.58 |
GSMUA_Achr5P08730_001 | Banana | nucleus | 31.54 | 30.77 |
Zm00001d030858_P001 | Maize | nucleus | 31.54 | 27.44 |
EES16240 | Sorghum | nucleus | 32.78 | 27.24 |
GSMUA_Achr6P24730_001 | Banana | nucleus | 29.05 | 25.36 |
Bra040325.1-P | Field mustard | nucleus | 27.39 | 23.49 |
Bra014483.1-P | Field mustard | nucleus | 24.07 | 22.75 |
Bra003422.1-P | Field mustard | nucleus | 25.73 | 20.88 |
Bra007545.1-P | Field mustard | nucleus | 25.31 | 20.54 |
Bra000372.1-P | Field mustard | mitochondrion, nucleus | 26.14 | 20.32 |
Bra018817.1-P | Field mustard | nucleus | 29.88 | 19.3 |
Bra012953.1-P | Field mustard | plastid | 21.16 | 18.55 |
Bra029315.1-P | Field mustard | nucleus | 17.84 | 18.45 |
Bra040741.1-P | Field mustard | nucleus | 12.86 | 14.83 |
Bra012701.1-P | Field mustard | nucleus, plastid | 12.45 | 14.02 |
Bra038491.1-P | Field mustard | nucleus | 12.45 | 7.71 |
Protein Annotations
EnsemblPlants:Bra024448.1 | EnsemblPlants:Bra024448.1-P | EnsemblPlantsGene:Bra024448 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 |
PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000253EF1B |
UniProt:M4E6P4 | MapMan:15.5.15 | : | : | : | : |
Description
AT5G67450 (E=2e-081) AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding
Coordinates
chrA06:+:15810122..15810847
Molecular Weight (calculated)
25925.9 Da
IEP (calculated)
8.159
GRAVY (calculated)
-0.850
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLNSPT SATATARPLL RYREEMEPDN LEQWAKRKRT KRQRIDQNHH NQETTPSEEE YLALCLLMLA RGTAVQPPLT PPPPSRRSPS DHRDFKCTVC
101: GKSFNSYQAL GGHKTSHRKP PANNANVPSG QEPSNNKSHS NGGSVLFSGN GTVSNGVNQS GKIHTCSICF KSFSSGQALG GHKRCHYDGG NNGNGNGSVE
201: VMGGSDVSDV DDERSSEQSA IGGHRGFDLN LPADQVSVAI S
101: GKSFNSYQAL GGHKTSHRKP PANNANVPSG QEPSNNKSHS NGGSVLFSGN GTVSNGVNQS GKIHTCSICF KSFSSGQALG GHKRCHYDGG NNGNGNGSVE
201: VMGGSDVSDV DDERSSEQSA IGGHRGFDLN LPADQVSVAI S
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.