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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08718 Canola nucleus 97.1 97.1
CDY36493 Canola nucleus 93.36 93.36
Bra037845.1-P Field mustard nucleus 80.08 83.55
Bra031834.1-P Field mustard nucleus 80.91 82.98
AT5G67450.1 Thale cress nucleus 80.5 79.18
Bra012914.1-P Field mustard nucleus 53.53 60.56
Bra029985.1-P Field mustard nucleus 54.36 59.28
Bra033666.1-P Field mustard nucleus 34.44 44.86
VIT_07s0129g00240.t01 Wine grape nucleus 42.74 44.21
TraesCS4A01G236000.1 Wheat nucleus 33.2 39.22
Bra010922.1-P Field mustard nucleus 37.76 39.06
Bra032845.1-P Field mustard nucleus 36.51 38.43
Bra009464.1-P Field mustard plastid 36.1 38.16
TraesCS4B01G079000.1 Wheat nucleus 34.02 37.27
TraesCS4D01G077900.1 Wheat nucleus 33.2 36.53
HORVU4Hr1G013460.1 Barley nucleus 33.2 36.53
TraesCS5B01G076400.1 Wheat nucleus 35.27 35.56
Bra038219.1-P Field mustard nucleus 38.59 35.23
Bra001752.1-P Field mustard nucleus 39.0 35.21
TraesCS5A01G070600.1 Wheat nucleus 34.85 34.85
Bra022436.1-P Field mustard nucleus 38.59 34.83
Os03t0610400-01 Rice nucleus 34.02 34.45
TraesCS5D01G082700.1 Wheat nucleus 34.02 34.45
Os12t0583700-00 Rice nucleus 32.37 31.58
GSMUA_Achr5P08730_001 Banana nucleus 31.54 30.77
Zm00001d030858_P001 Maize nucleus 31.54 27.44
EES16240 Sorghum nucleus 32.78 27.24
GSMUA_Achr6P24730_001 Banana nucleus 29.05 25.36
Bra040325.1-P Field mustard nucleus 27.39 23.49
Bra014483.1-P Field mustard nucleus 24.07 22.75
Bra003422.1-P Field mustard nucleus 25.73 20.88
Bra007545.1-P Field mustard nucleus 25.31 20.54
Bra000372.1-P Field mustard mitochondrion, nucleus 26.14 20.32
Bra018817.1-P Field mustard nucleus 29.88 19.3
Bra012953.1-P Field mustard plastid 21.16 18.55
Bra029315.1-P Field mustard nucleus 17.84 18.45
Bra040741.1-P Field mustard nucleus 12.86 14.83
Bra012701.1-P Field mustard nucleus, plastid 12.45 14.02
Bra038491.1-P Field mustard nucleus 12.45 7.71
Protein Annotations
EnsemblPlants:Bra024448.1EnsemblPlants:Bra024448.1-PEnsemblPlantsGene:Bra024448GO:GO:0003674GO:GO:0003676GO:GO:0005488
InterPro:IPR013087InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typePANTHER:PTHR26374PANTHER:PTHR26374:SF263PFAM:PF13912
PFscan:PS50157ScanProsite:PS00028SEG:segSMART:SM00355SUPFAM:SSF57667UniParc:UPI000253EF1B
UniProt:M4E6P4MapMan:15.5.15::::
Description
AT5G67450 (E=2e-081) AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding
Coordinates
chrA06:+:15810122..15810847
Molecular Weight (calculated)
25925.9 Da
IEP (calculated)
8.159
GRAVY (calculated)
-0.850
Length
241 amino acids
Sequence
(BLAST)
001: MALETLNSPT SATATARPLL RYREEMEPDN LEQWAKRKRT KRQRIDQNHH NQETTPSEEE YLALCLLMLA RGTAVQPPLT PPPPSRRSPS DHRDFKCTVC
101: GKSFNSYQAL GGHKTSHRKP PANNANVPSG QEPSNNKSHS NGGSVLFSGN GTVSNGVNQS GKIHTCSICF KSFSSGQALG GHKRCHYDGG NNGNGNGSVE
201: VMGGSDVSDV DDERSSEQSA IGGHRGFDLN LPADQVSVAI S
Best Arabidopsis Sequence Match ( AT5G67450.1 )
(BLAST)
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.