Factsheet for Bra031834.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37851	Canola	nucleus	91.49	100.0
CDY43576	Canola	nucleus	85.11	95.69
Bra037845.1-P	Field mustard	nucleus	85.53	87.01
Bra024448.1-P	Field mustard	nucleus	82.98	80.91
AT5G67450.1	Thale cress	nucleus	81.7	78.37
Bra029985.1-P	Field mustard	nucleus	59.15	62.9
Bra012914.1-P	Field mustard	nucleus	56.6	62.44
Bra033666.1-P	Field mustard	nucleus	36.17	45.95
VIT_07s0129g00240.t01	Wine grape	nucleus	42.13	42.49
Bra010922.1-P	Field mustard	nucleus	40.85	41.2
Bra032845.1-P	Field mustard	nucleus	39.15	40.17
TraesCS4A01G236000.1	Wheat	nucleus	33.62	38.73
Bra009464.1-P	Field mustard	plastid	36.17	37.28
TraesCS4B01G079000.1	Wheat	nucleus	34.89	37.27
TraesCS4D01G077900.1	Wheat	nucleus	33.62	36.07
HORVU4Hr1G013460.1	Barley	nucleus	33.62	36.07
Bra001752.1-P	Field mustard	nucleus	40.0	35.21
TraesCS5B01G076400.1	Wheat	nucleus	35.74	35.15
Os03t0610400-01	Rice	nucleus	35.32	34.87
TraesCS5A01G070600.1	Wheat	nucleus	35.74	34.85
Bra038219.1-P	Field mustard	nucleus	38.72	34.47
Bra022436.1-P	Field mustard	nucleus	39.15	34.46
TraesCS5D01G082700.1	Wheat	nucleus	34.47	34.03
GSMUA_Achr5P08730_001	Banana	nucleus	32.77	31.17
Os12t0583700-00	Rice	nucleus	32.34	30.77
Zm00001d030858_P001	Maize	nucleus	33.62	28.52
EES16240	Sorghum	nucleus	34.04	27.59
GSMUA_Achr6P24730_001	Banana	nucleus	29.36	25.0
Bra040325.1-P	Field mustard	nucleus	27.66	23.13
Bra014483.1-P	Field mustard	nucleus	24.68	22.75
Bra003422.1-P	Field mustard	nucleus	26.81	21.21
Bra007545.1-P	Field mustard	nucleus	26.38	20.88
Bra000372.1-P	Field mustard	mitochondrion, nucleus	26.81	20.32
Bra018817.1-P	Field mustard	nucleus	29.79	18.77
Bra012953.1-P	Field mustard	plastid	21.28	18.18
Bra029315.1-P	Field mustard	nucleus	17.87	18.03
Bra040741.1-P	Field mustard	nucleus	13.62	15.31
Bra012701.1-P	Field mustard	nucleus, plastid	13.19	14.49
Bra038491.1-P	Field mustard	nucleus	13.62	8.23

Protein Annotations

EnsemblPlants:Bra031834.1	EnsemblPlants:Bra031834.1-P	EnsemblPlantsGene:Bra031834	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF263	PFAM:PF13912
PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0002546ADC
UniProt:M4ESQ4	MapMan:15.5.15	:	:	:	:

Description

AT5G67450 (E=5e-080) AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding

Coordinates

chrA02:+:27629364..27630071

Molecular Weight (calculated)

25141.8 Da

IEP (calculated)

7.853

GRAVY (calculated)

-0.764

Length

235 amino acids

Sequence
(BLAST)

001: MALETLNSPT SATASARPLL RYREEMEPEN LEQWAKRKRT KRQRFDQSRL NQETAPSEEE YLALCLLMLA RGSAVQSPLP PSSSSDHRGY KCTVCGKSFS
101: SYQALGGHKT SHRKPASNVN VPINQEQSNN SHSNSNGGSV AINGNGVSQS GKIHTCSICF KSFSSGQALG GHKRCHYDAG NNGNGNGSSS NSVEVVGGSD
201: GSYVDDERSS EQSATGDNRG FDLNLPADQV AVVIS

Best Arabidopsis Sequence Match ( AT5G67450.1 )
(BLAST)

001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS

Arabidopsis Description

AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.