Factsheet for Bra007242.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27219	Canola	cytosol, nucleus, plastid	100.0	100.0
Bra014695.1-P	Field mustard	cytosol	68.05	90.55
AT3G56380.2	Thale cress	cytosol, nucleus, plastid	78.11	85.71
Bra000199.1-P	Field mustard	cytosol	73.37	77.02
KRH53721	Soybean	cytosol	55.62	69.12
VIT_13s0067g03070.t01	Wine grape	cytosol	61.54	67.97
Solyc06g048930.2.1	Tomato	cytosol, nucleus, plastid	58.58	66.89
PGSC0003DMT400042922	Potato	cytosol	58.58	66.89
KRH64213	Soybean	cytosol	56.21	65.07
Solyc06g048600.2.1	Tomato	cytosol, nucleus, plastid	56.21	60.9
PGSC0003DMT400070964	Potato	cytosol, nucleus, plastid	56.21	60.9
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	46.75	42.7
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	44.97	42.46
Bra033773.1-P	Field mustard	nucleus	43.79	41.11
Bra003782.1-P	Field mustard	cytosol	46.75	40.1
Bra010132.1-P	Field mustard	nucleus	44.38	39.47
Bra016526.1-P	Field mustard	cytosol	47.34	38.65
Bra025708.1-P	Field mustard	nucleus	46.15	36.62
Bra000224.1-P	Field mustard	nucleus	44.38	34.72
Bra016943.1-P	Field mustard	cytosol	44.97	34.23
Bra004615.1-P	Field mustard	nucleus	43.2	34.11
Bra027829.1-P	Field mustard	nucleus	44.97	33.63
Bra007295.1-P	Field mustard	cytosol	45.56	32.63
Bra019524.1-P	Field mustard	cytosol	24.85	31.34
Bra014649.1-P	Field mustard	nucleus	43.2	31.2
Bra003265.1-P	Field mustard	cytosol	43.79	30.83
Bra018439.1-P	Field mustard	nucleus	45.56	30.68
Bra019932.1-P	Field mustard	nucleus	45.56	30.43
Bra031714.1-P	Field mustard	nucleus	46.15	29.89
Bra036963.1-P	Field mustard	nucleus	46.15	29.89

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra007242	EnsemblPlants:Bra007242.1	EnsemblPlants:Bra007242.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4CSQ0	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF2	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002542B87

Description

AT3G56380 (E=2e-050) ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17); transcription regulator/ two-component response regulator

Coordinates

chrA09:+:28161472..28162339

Molecular Weight (calculated)

19225.5 Da

IEP (calculated)

7.244

GRAVY (calculated)

-0.113

Length

169 amino acids

Sequence
(BLAST)

001: MEEELHVLAV DDNLMDRKLV ERILKISSCK GKLYYSNFQF FIFLLNPKNQ DSSMLWYYVT TAENGIRALE YLGLGDSQQA DSSSTNNVMK VNLIITDYCM
101: PGMTGFELLK IVKQESSNLK EVPVVILSSE NIPTRINKCL ASGAQMFMQK PLKLSDVEKL KCHLLNCRS

Best Arabidopsis Sequence Match ( AT3G56380.2 )
(BLAST)

001: MNKGCGSGSD SCLSSMEEEL HVLAVDDNLI DRKLVERILK ISSCKVTTAE NGLRALEYLG LGDPQQTDSL TNVMKVNLII TDYCMPGMTG FELLKKVKQE
101: SSNLKEVPVV ILSSENIPTR INKCLASGAQ MFMQKPLKLS DVEKLKCHLL NCRS

Arabidopsis Description

ARR17Response regulator 17 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQB0]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.