Factsheet for Bra014695.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71200	Canola	cytosol	100.0	100.0
CDY59626	Canola	cytosol	100.0	100.0
CDX75990	Canola	cytosol	99.21	99.21
AT3G56380.2	Thale cress	cytosol, nucleus, plastid	91.34	75.32
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	90.55	68.05
Bra000199.1-P	Field mustard	cytosol	84.25	66.46
VIT_13s0067g03070.t01	Wine grape	cytosol	76.38	63.4
KRH53721	Soybean	cytosol	64.57	60.29
Solyc06g048930.2.1	Tomato	cytosol, nucleus, plastid	67.72	58.11
PGSC0003DMT400042922	Potato	cytosol	67.72	58.11
KRH64213	Soybean	cytosol	65.35	56.85
Solyc06g048600.2.1	Tomato	cytosol, nucleus, plastid	64.57	52.56
PGSC0003DMT400070964	Potato	cytosol, nucleus, plastid	64.57	52.56
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	54.33	37.3
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	51.18	36.31
Bra033773.1-P	Field mustard	nucleus	49.61	35.0
Bra003782.1-P	Field mustard	cytosol	53.54	34.52
Bra010132.1-P	Field mustard	nucleus	49.61	33.16
Bra016526.1-P	Field mustard	cytosol	53.54	32.85
Bra025708.1-P	Field mustard	nucleus	53.54	31.92
Bra004615.1-P	Field mustard	nucleus	51.18	30.37
Bra000224.1-P	Field mustard	nucleus	51.18	30.09
Bra027829.1-P	Field mustard	nucleus	51.97	29.2
Bra016943.1-P	Field mustard	cytosol	50.39	28.83
Bra007295.1-P	Field mustard	cytosol	52.76	28.39
Bra003265.1-P	Field mustard	cytosol	51.97	27.5
Bra014649.1-P	Field mustard	nucleus	50.39	27.35
Bra018439.1-P	Field mustard	nucleus	51.97	26.29
Bra019932.1-P	Field mustard	nucleus	51.97	26.09
Bra036963.1-P	Field mustard	nucleus	52.76	25.67
Bra031714.1-P	Field mustard	nucleus	52.76	25.67
Bra019524.1-P	Field mustard	cytosol	24.41	23.13

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra014695	EnsemblPlants:Bra014695.1	EnsemblPlants:Bra014695.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4DDX6	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF2	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000254478E

Description

AT3G56380 (E=2e-050) ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17); transcription regulator/ two-component response regulator

Coordinates

chrA04:-:2305123..2305934

Molecular Weight (calculated)

14049.2 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.055

Length

127 amino acids

Sequence
(BLAST)

001: MDEELHVLAV DDNLIDLTTA ENGLRALEYL GLGDPQQTES LTTNSVMKVN LIITDYCMPG MTGFELLKIV KQESSNLKEV PVVILSSENI PTRINKCLAS
101: GAQMFMQKPL KLSDVEKLKG HVLNCRS

Best Arabidopsis Sequence Match ( AT3G56380.2 )
(BLAST)

001: MNKGCGSGSD SCLSSMEEEL HVLAVDDNLI DRKLVERILK ISSCKVTTAE NGLRALEYLG LGDPQQTDSL TNVMKVNLII TDYCMPGMTG FELLKKVKQE
101: SSNLKEVPVV ILSSENIPTR INKCLASGAQ MFMQKPLKLS DVEKLKCHLL NCRS

Arabidopsis Description

ARR17Response regulator 17 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQB0]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.