Factsheet for Bra016943.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023876.1-P
Bra025394.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41310.1	Bra023876.1-P	AT3G21510.1	16965536
AT2G41310.1	Bra023876.1-P	AT3G21510.1	18642946
AT2G41310.1	Bra025394.1-P	AT3G29350.1	16965536
AT2G41310.1	Bra036215.1-P	AT3G29350.1	16965536

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06934	Canola	cytosol	99.55	99.55
CDY14761	Canola	cytoskeleton, cytosol, nucleus	95.95	95.95
Bra000224.1-P	Field mustard	nucleus	86.04	88.43
Bra004615.1-P	Field mustard	nucleus	81.08	84.11
AT2G41310.1	Thale cress	nucleus	85.14	84.0
Bra003265.1-P	Field mustard	cytosol	72.07	66.67
Bra007295.1-P	Field mustard	cytosol	70.27	66.1
Bra014649.1-P	Field mustard	nucleus	69.37	65.81
PGSC0003DMT400076758	Potato	nucleus	61.71	60.62
Solyc10g079600.1.1	Tomato	nucleus	60.81	59.47
PGSC0003DMT400076726	Potato	nucleus	60.36	59.29
GSMUA_Achr3P08680_001	Banana	cytosol	50.0	58.73
GSMUA_Achr5P08230_001	Banana	nucleus	50.9	58.55
PGSC0003DMT400007618	Potato	nucleus	55.86	57.94
GSMUA_Achr11P...	Banana	nucleus	48.2	57.84
VIT_08s0007g05390.t01	Wine grape	nucleus	56.31	57.34
GSMUA_AchrUn_...	Banana	nucleus	51.35	57.0
GSMUA_Achr11P...	Banana	nucleus	46.4	56.91
KRH66808	Soybean	nucleus	62.16	55.65
TraesCS4B01G178900.1	Wheat	cytosol	35.14	55.32
Solyc10g079700.1.1	Tomato	nucleus	59.46	55.23
KRG95133	Soybean	nucleus	60.81	54.88
Os12t0139400-01	Rice	nucleus	49.1	54.23
Os11t0143300-02	Rice	cytosol	49.1	52.4
KXG27703	Sorghum	nucleus	46.4	50.99
Os01t0952500-01	Rice	cytosol	53.15	50.86
Bra014695.1-P	Field mustard	cytosol	28.83	50.39
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	40.54	50.28
Zm00001d011849_P002	Maize	cytosol	52.7	50.21
Bra033773.1-P	Field mustard	nucleus	40.54	50.0
EES02064	Sorghum	cytosol	54.5	49.39
TraesCS5D01G140200.1	Wheat	nucleus	50.9	48.92
TraesCS5B01G132900.2	Wheat	cytosol	50.45	48.28
TraesCS5A01G131600.2	Wheat	nucleus	50.0	46.64
Bra000199.1-P	Field mustard	cytosol	33.78	46.58
TraesCS3B01G548600.1	Wheat	cytosol	50.0	46.25
Zm00001d023242_P001	Maize	nucleus	28.83	46.04
Bra010132.1-P	Field mustard	nucleus	39.19	45.79
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	34.23	44.97
HORVU3Hr1G108540.2	Barley	nucleus	50.0	44.76
HORVU5Hr1G043090.1	Barley	nucleus	49.1	44.67
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	36.94	44.32
Bra016526.1-P	Field mustard	cytosol	40.54	43.48
Bra003782.1-P	Field mustard	cytosol	37.39	42.13
Bra025708.1-P	Field mustard	nucleus	39.64	41.31
Bra027829.1-P	Field mustard	nucleus	41.44	40.71
Bra019524.1-P	Field mustard	cytosol	24.32	40.3
Zm00001d052476_P001	Maize	nucleus	22.07	40.16
TraesCS3D01G494600.1	Wheat	nucleus	48.65	40.15
Bra018439.1-P	Field mustard	nucleus	42.34	37.45
KXG22820	Sorghum	endoplasmic reticulum	46.4	36.92
Bra031714.1-P	Field mustard	nucleus	42.79	36.4
Bra036963.1-P	Field mustard	nucleus	42.79	36.4
Bra019932.1-P	Field mustard	nucleus	41.44	36.36
GSMUA_Achr8P09640_001	Banana	cytosol	26.58	33.52

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra016943	EnsemblPlants:Bra016943.1	EnsemblPlants:Bra016943.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4DKB4	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF26	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00025452F8

Description

AT2G41310 (E=9e-097) ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator

Coordinates

chrA04:+:17476294..17482964

Molecular Weight (calculated)

25045.1 Da

IEP (calculated)

5.447

GRAVY (calculated)

-0.489

Length

222 amino acids

Sequence
(BLAST)

001: MGMATESQFH VLAVDDSLVD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RESNESNDPN APSSSPVTHQ EIEINLIITD YCMPGMTGYD LLKRVKESAA
101: FRSIPVVIMS SENVPARISR CLEEGAEEFF LKPVKLADLT KLKPHMMKTK LKKESENSAK EDNAVLKHEI RKEEEPSVIE VLPLHQEVEQ EPMLSNNKRK
201: AMEEVISTNR SRPKYNDITT LV

Best Arabidopsis Sequence Match ( AT2G41310.1 )
(BLAST)

001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV

Arabidopsis Description

ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.