Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G012090.2 | |
| HORVU5Hr1G118480.8 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57040.1 | HORVU5Hr1G012090.2 | AT1G16970.1 | 18642946 |
| AT3G57040.1 | HORVU5Hr1G118480.8 | AT5G08720.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G548600.1 | Wheat | cytosol | 87.9 | 90.83 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 47.58 | 83.69 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 84.68 | 78.07 |
| Os01t0952500-01 | Rice | cytosol | 68.55 | 73.28 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 35.89 | 72.36 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 41.13 | 69.86 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 39.11 | 69.29 |
| Zm00001d011849_P002 | Maize | cytosol | 64.11 | 68.24 |
| EES02064 | Sorghum | cytosol | 66.94 | 67.76 |
| Solyc02g071220.2.1 | Tomato | nucleus | 43.55 | 65.06 |
| PGSC0003DMT400007977 | Potato | nucleus | 42.74 | 65.03 |
| CDY65526 | Canola | cytosol | 40.73 | 63.92 |
| GSMUA_Achr11P... | Banana | nucleus | 46.37 | 62.16 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 45.56 | 59.79 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 46.37 | 59.59 |
| KRH13391 | Soybean | nucleus | 42.74 | 59.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.18 | 58.5 |
| KRH20737 | Soybean | nucleus | 41.94 | 58.1 |
| GSMUA_Achr11P... | Banana | nucleus | 41.53 | 56.91 |
| KRH30056 | Soybean | nucleus | 42.74 | 56.68 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 37.1 | 56.44 |
| HORVU2Hr1G090270.1 | Barley | plastid | 30.65 | 56.3 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 48.39 | 55.05 |
| KRH62857 | Soybean | nucleus | 40.73 | 54.59 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 43.15 | 54.31 |
| CDX79942 | Canola | nucleus | 46.37 | 53.49 |
| Bra004615.1-P | Field mustard | nucleus | 45.97 | 53.27 |
| CDY23856 | Canola | nucleus | 45.97 | 53.02 |
| Bra000224.1-P | Field mustard | nucleus | 45.56 | 52.31 |
| CDY35419 | Canola | nucleus | 45.56 | 52.31 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 45.97 | 51.82 |
| CDY22518 | Canola | nucleus | 45.16 | 51.61 |
| AT2G41310.1 | Thale cress | nucleus | 45.97 | 50.67 |
| Solyc10g079600.1.1 | Tomato | nucleus | 46.37 | 50.66 |
| PGSC0003DMT400076726 | Potato | nucleus | 45.97 | 50.44 |
| Bra016943.1-P | Field mustard | cytosol | 44.76 | 50.0 |
| CDY06934 | Canola | cytosol | 44.76 | 50.0 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 44.76 | 50.0 |
| PGSC0003DMT400076758 | Potato | nucleus | 45.56 | 50.0 |
| KRH66808 | Soybean | nucleus | 50.0 | 50.0 |
| KRG95133 | Soybean | nucleus | 48.79 | 49.19 |
| PGSC0003DMT400007618 | Potato | nucleus | 41.94 | 48.6 |
| CDX76036 | Canola | nucleus | 43.15 | 47.56 |
| AT3G57040.1 | Thale cress | nucleus | 44.76 | 47.44 |
| Solyc10g079700.1.1 | Tomato | nucleus | 45.56 | 47.28 |
| CDX72077 | Canola | cytosol | 44.76 | 47.23 |
| Bra007295.1-P | Field mustard | cytosol | 44.35 | 46.61 |
| CDY06142 | Canola | cytosol | 43.95 | 46.19 |
| Bra014649.1-P | Field mustard | nucleus | 43.15 | 45.73 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 44.76 | 45.49 |
| CDX67674 | Canola | cytosol | 42.74 | 45.3 |
| CDY30966 | Canola | cytosol | 42.34 | 45.26 |
| HORVU2Hr1G120490.2 | Barley | plastid | 31.05 | 44.51 |
| Bra003265.1-P | Field mustard | cytosol | 42.34 | 43.75 |
| KRH18706 | Soybean | nucleus | 36.69 | 42.72 |
| KRH64643 | Soybean | nucleus | 39.92 | 42.13 |
| KRH53261 | Soybean | nucleus | 39.11 | 41.81 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 39.11 | 41.81 |
| AT2G07440.1 | Thale cress | cytosol | 19.76 | 36.03 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 22.58 | 31.82 |
| HORVU6Hr1G059200.1 | Barley | cytosol, plastid | 20.97 | 27.08 |
| HORVU2Hr1G077000.3 | Barley | golgi, mitochondrion, plasma membrane, plastid | 22.98 | 19.72 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU3Hr1G108540 | EnsemblPlants:HORVU3Hr1G108540.2 | InterPro:IPR001789 | UniProt:M0XY19 | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF31 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI000294A9F6 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:675330862..675334130
Molecular Weight (calculated)
26753.5 Da
IEP (calculated)
5.410
GRAVY (calculated)
-0.590
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVDAESRF HVLAVDDSVI DRKLIEMLLK TSSYQVTTVD SGSKALEVLG LRDEDSSSSS SSSSSPPSSS APDHHQEVGV NLIITDYCMP GMTGYDLLRR
101: VKGSSSLKDI PVVIMSSENV PARISRCLED GAEEFFLKPV KLADMKKLKS HLVRRKQPQL QPQPQPQQKP QTEQQQPQTQ EKPRQQQKAE QAQAEPAAAE
201: EVPAEVTATG ITGDCGGGSR KRKAAMMEQD GTNASLSSGG SSSLAVET
101: VKGSSSLKDI PVVIMSSENV PARISRCLED GAEEFFLKPV KLADMKKLKS HLVRRKQPQL QPQPQPQQKP QTEQQQPQTQ EKPRQQQKAE QAQAEPAAAE
201: EVPAEVTATG ITGDCGGGSR KRKAAMMEQD GTNASLSSGG SSSLAVET
001: MMSVGGIGGI ESAPLDLDEV HVLAVDDSLV DRIVIERLLR ITSCKVTAVD SGWRALEFLG LDNEKASAEF DRLKVDLIIT DYCMPGMTGY ELLKKIKESS
101: NFREVPVVIM SSENVLTRID RCLEEGAQDF LLKPVKLADV KRLRSHLTKD VKLSNGNKRK LPEDSSSVNS SLPPPSPPLT ISPESSPPLT VSTESSDSSP
201: PLSPVEIFST SPLSSPIDDE DDDVLTSSSE ESPIRRQKMR SPGLD
101: NFREVPVVIM SSENVLTRID RCLEEGAQDF LLKPVKLADV KRLRSHLTKD VKLSNGNKRK LPEDSSSVNS SLPPPSPPLT ISPESSPPLT VSTESSDSSP
201: PLSPVEIFST SPLSSPIDDE DDDVLTSSSE ESPIRRQKMR SPGLD
Arabidopsis Description
ARR4Two-component response regulator ARR4 [Source:UniProtKB/Swiss-Prot;Acc:O82798]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.