Factsheet for HORVU5Hr1G118480.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G108540.2
HORVU5Hr1G043090.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08720.1	HORVU3Hr1G108540.2	AT3G57040.1	18642946
AT5G08720.1	HORVU5Hr1G043090.1	AT3G57040.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G520700.1	Wheat	plastid	86.21	75.14
TraesCS4A01G353400.1	Wheat	plastid	85.26	74.41
TraesCS5D01G519900.1	Wheat	plastid	86.69	72.45
Os03t0837900-01	Rice	plastid	74.96	65.51
EER93131	Sorghum	plastid	71.95	63.32
PGSC0003DMT400031503	Potato	cytosol	35.82	60.43
Zm00001d034779_P001	Maize	plastid	70.84	60.32
PGSC0003DMT400037740	Potato	cytosol	58.16	56.9
Solyc05g009080.2.1	Tomato	nucleus	58.64	52.86
GSMUA_Achr6P18920_001	Banana	mitochondrion	60.06	52.57
VIT_07s0031g02780.t01	Wine grape	plastid	59.11	50.75
KRH53975	Soybean	plastid	57.05	49.72
AT5G08720.1	Thale cress	plastid	56.42	49.51
KRH59638	Soybean	plastid	56.74	49.38
KRH40988	Soybean	nucleus	56.26	49.24
KRH63959	Soybean	plastid	55.63	49.09
CDY21561	Canola	plastid	55.94	48.96
Bra009364.1-P	Field mustard	plastid	55.94	48.76
CDX69927	Canola	plastid	55.94	48.49
HORVU3Hr1G114370.2	Barley	plastid	8.87	18.92

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.2	UniProt:A0A287SWT1	InterPro:COQ10_START	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009791	GO:GO:0009987	GO:GO:0010239
GO:GO:0010468	GO:GO:0031426	GO:GO:0042644	GO:GO:0048027	GO:GO:0048507	EnsemblPlantsGene:HORVU5Hr1G118480
EnsemblPlants:HORVU5Hr1G118480.8	InterPro:IPR023393	PFAM:PF03364	PANTHER:PTHR34060	PANTHER:PTHR34060:SF2	SUPFAM:SSF55961
InterPro:START-like_dom_sf	UniParc:UPI000B481C0C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:652970050..652974530

Molecular Weight (calculated)

72052.8 Da

IEP (calculated)

9.707

GRAVY (calculated)

-0.353

Length

631 amino acids

Sequence
(BLAST)

001: RRPAAPPGAA AAPRRHQARG AQRAVRRGRG VVARAAGVRX RVFASVAVAA DVDTVWRIIT DYERLADFVP NLVHSGRIPC PHEGRIWLEQ RGLQQALYWH
101: IEARVVLDLR EVPDAVDGRE LHFSMVDGDF KKFEGKWSVR AGPRSASAIL LYEVNVIPRF NFPAIFLERI IRSDLPVNLT ALAFRSEKMY LENHKFGPTK
201: FTGAESKPLN LRSATIENDV ISSSKFKEAP ASSGFGGVLA SPPPELNGKW GVYGSVCRLD RPCVVDEIHL RRFDGLLERE GAHRCVVASI TVKAPVREVW
301: NALTAYEKLP EIIPNLAISR IILRDNNKVR ILQEGCKGLL YMVLHARVVM DLREKLEREI SFEQVEGDFY SFKGKWRLEQ LGDQHTLLKY MVETKMHKDT
401: FLSESILEEV IYEDLPSNLC AIRDYVEKAE AERSNSTVHS DAPTIPDTVP LCYTQGRQSE QASVQCSSSS TRQRPKVPGL QKDIEVLKSE LGSFIEKHGQ
501: DGFMPKRKHL RTHGRVDIEK AITRMGGFRK IATLMNLSLS YKNRKPRGYW DNLENLQEEI RRFQKNWGMD PSYMPSRKAF ERAGTFDYFY VDQVWYAIDR
601: FSYICRLQLV PHFGHVISQR IIFIAYFYMV R

Best Arabidopsis Sequence Match ( AT5G08720.1 )
(BLAST)

001: MSVSKFPHLS HGVHTINFLN EPVFLSVLLP SPSRIRVFSS ISTSGIGGGV AKCHGTRHSG AGGRGDNGLR RDSGLGFDER GERKVRCEVD VISWRERRIR
101: GEIWVDSDSQ SVWNVLTDYE RLADFIPNLV WSGRIPCPHP GRIWLEQRGL QRALYWHIEA RVVLDLHECL DSPNGRELHF SMVDGDFKKF EGKWSVKSGI
201: RSVGTVLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRAVA RQAEKIYKDC GKPSIIEDLL GIISSQPAPS NGIEFDSLAT ERSVASSVGS LAHSNELNNN
301: WGVYGKACKL DKPCTVDEVH LRRFDGLLEN GGVHRCAVAS ITVKAPVCEV WKVLTSYESL PEIVPNLAIS KILSRDNNKV RILQEGCKGL LYMVLHARAV
401: LDLHEIREQE IRFEQVEGDF DSLEGKWIFE QLGSHHTLLK YTVESKMRKD SFLSEAIMEE VIYEDLPSNL CAIRDYIEKR GEKSSESCKL ETCQVSEETC
501: SSSRAKSVET VYNNDDGSDQ TKQRRRIPGL QRDIEVLKSE ILKFISEHGQ EGFMPMRKQL RLHGRVDIEK AITRMGGFRR IALMMNLSLA YKHRKPKGYW
601: DNLENLQEEI GRFQQSWGMD PSFMPSRKSF ERAGRYDIAR ALEKWGGLHE VSRLLALNVR HPNRQLNSRK DNGNTILRTE STEADLNSTV NKNNKPYVSQ
701: DTEKWLYNLK DLDINWVQY

Arabidopsis Description

At5g08720 [Source:UniProtKB/TrEMBL;Acc:Q9C5A5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.