Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59638 | Soybean | plastid | 92.93 | 92.41 |
| KRH53975 | Soybean | plastid | 70.18 | 69.89 |
| KRH63959 | Soybean | plastid | 68.52 | 69.09 |
| PGSC0003DMT400037740 | Potato | cytosol | 60.75 | 67.91 |
| Solyc05g009080.2.1 | Tomato | nucleus | 61.58 | 63.43 |
| VIT_07s0031g02780.t01 | Wine grape | plastid | 64.49 | 63.27 |
| PGSC0003DMT400031503 | Potato | cytosol | 32.59 | 62.83 |
| AT5G08720.1 | Thale cress | plastid | 60.61 | 60.78 |
| GSMUA_Achr6P18920_001 | Banana | mitochondrion | 59.5 | 59.5 |
| CDY21561 | Canola | plastid | 59.36 | 59.36 |
| Bra009364.1-P | Field mustard | plastid | 59.5 | 59.25 |
| CDX69927 | Canola | plastid | 59.36 | 58.79 |
| Os03t0837900-01 | Rice | plastid | 57.0 | 56.93 |
| HORVU5Hr1G118480.8 | Barley | mitochondrion | 49.24 | 56.26 |
| EER93131 | Sorghum | plastid | 55.48 | 55.79 |
| TraesCS5B01G520700.1 | Wheat | plastid | 55.2 | 54.97 |
| TraesCS4A01G353400.1 | Wheat | plastid | 55.06 | 54.91 |
| Zm00001d034779_P001 | Maize | plastid | 55.34 | 53.85 |
| TraesCS5D01G519900.1 | Wheat | plastid | 55.48 | 52.98 |
| KRH33686 | Soybean | plastid | 7.77 | 20.59 |
Protein Annotations
| EntrezGene:100785172 | Gene3D:3.30.530.20 | MapMan:35.2 | UniProt:A0A0R0IEX8 | EMBL:ACUP02004743 | InterPro:COQ10_START |
| EnsemblPlantsGene:GLYMA_08G003500 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031426 | InterPro:IPR023393 |
| EnsemblPlants:KRH40988 | ProteinID:KRH40988 | ProteinID:KRH40988.1 | PFAM:PF03364 | PANTHER:PTHR34060 | PANTHER:PTHR34060:SF2 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI0002338120 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr8:-:262577..267803
Molecular Weight (calculated)
82504.0 Da
IEP (calculated)
6.995
GRAVY (calculated)
-0.525
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MITTCRTSST TNLGGAQPLS LRFLSKPAPF LSLSFFFPYH SANNGIAVSS TQCKPRIRCD KEVGNGNNNG IEEDEEAERE VQCEVQVVSW RERRVKAEIP
101: VNADIESVWN ALTDYDHLAD FIPNLVWSGK IPCPYPGRIW LEQRGFQRSM YWHIEARVVL DLQELINSAW DRELHFSMVD GDFKKFEGKW SVKSGTRSSS
201: TNLSYEVNVI PRFNFPAIFL ERIIKSDLPV NLQALAYRVE RNISGNQKLS LPENHLDKTS SDINESSAQK INSALCENKE DLVNSIPGTL PMPSSEVNIN
301: NWGAFGKSCR LDRPCMVDEI HLRRFDGLLE NGGVHRCVFA SITVKAPVRD VWTVMSSYES LPEIVPNLAI SKILSRDNNK VRILQEGCKG LLYMVLHARV
401: VLDLCEYLEQ EISFEQVEGD FDSFQGKWTF EQLGNHHTLL KYSLESKMRK DTFLSEAIME EVIYEDLPSN LCAIRDYIEN KTASNILEAC KQNTNSGQQT
501: VPSGFEDDDS YCSAEDLSDC NAQSSSQQRP RVPGLQRDIE VLKSELLKFI AEHGQEGFMP MRKQLRLHGR VDIEKAINRK GGFRKIATIM NLSLAYKHRK
601: PKGYWDNLEN LHYEISRFQR SWGMDPSFMP SRRSFERAGR FDIARALEKW GGLRQVSRLL SLKVRRQRSR QGKLAKDKKV DDDVASPDVD REIKTPSRPT
701: VSQDPQKWLT ELKQLDINWV E
101: VNADIESVWN ALTDYDHLAD FIPNLVWSGK IPCPYPGRIW LEQRGFQRSM YWHIEARVVL DLQELINSAW DRELHFSMVD GDFKKFEGKW SVKSGTRSSS
201: TNLSYEVNVI PRFNFPAIFL ERIIKSDLPV NLQALAYRVE RNISGNQKLS LPENHLDKTS SDINESSAQK INSALCENKE DLVNSIPGTL PMPSSEVNIN
301: NWGAFGKSCR LDRPCMVDEI HLRRFDGLLE NGGVHRCVFA SITVKAPVRD VWTVMSSYES LPEIVPNLAI SKILSRDNNK VRILQEGCKG LLYMVLHARV
401: VLDLCEYLEQ EISFEQVEGD FDSFQGKWTF EQLGNHHTLL KYSLESKMRK DTFLSEAIME EVIYEDLPSN LCAIRDYIEN KTASNILEAC KQNTNSGQQT
501: VPSGFEDDDS YCSAEDLSDC NAQSSSQQRP RVPGLQRDIE VLKSELLKFI AEHGQEGFMP MRKQLRLHGR VDIEKAINRK GGFRKIATIM NLSLAYKHRK
601: PKGYWDNLEN LHYEISRFQR SWGMDPSFMP SRRSFERAGR FDIARALEKW GGLRQVSRLL SLKVRRQRSR QGKLAKDKKV DDDVASPDVD REIKTPSRPT
701: VSQDPQKWLT ELKQLDINWV E
001: MSVSKFPHLS HGVHTINFLN EPVFLSVLLP SPSRIRVFSS ISTSGIGGGV AKCHGTRHSG AGGRGDNGLR RDSGLGFDER GERKVRCEVD VISWRERRIR
101: GEIWVDSDSQ SVWNVLTDYE RLADFIPNLV WSGRIPCPHP GRIWLEQRGL QRALYWHIEA RVVLDLHECL DSPNGRELHF SMVDGDFKKF EGKWSVKSGI
201: RSVGTVLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRAVA RQAEKIYKDC GKPSIIEDLL GIISSQPAPS NGIEFDSLAT ERSVASSVGS LAHSNELNNN
301: WGVYGKACKL DKPCTVDEVH LRRFDGLLEN GGVHRCAVAS ITVKAPVCEV WKVLTSYESL PEIVPNLAIS KILSRDNNKV RILQEGCKGL LYMVLHARAV
401: LDLHEIREQE IRFEQVEGDF DSLEGKWIFE QLGSHHTLLK YTVESKMRKD SFLSEAIMEE VIYEDLPSNL CAIRDYIEKR GEKSSESCKL ETCQVSEETC
501: SSSRAKSVET VYNNDDGSDQ TKQRRRIPGL QRDIEVLKSE ILKFISEHGQ EGFMPMRKQL RLHGRVDIEK AITRMGGFRR IALMMNLSLA YKHRKPKGYW
601: DNLENLQEEI GRFQQSWGMD PSFMPSRKSF ERAGRYDIAR ALEKWGGLHE VSRLLALNVR HPNRQLNSRK DNGNTILRTE STEADLNSTV NKNNKPYVSQ
701: DTEKWLYNLK DLDINWVQY
101: GEIWVDSDSQ SVWNVLTDYE RLADFIPNLV WSGRIPCPHP GRIWLEQRGL QRALYWHIEA RVVLDLHECL DSPNGRELHF SMVDGDFKKF EGKWSVKSGI
201: RSVGTVLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRAVA RQAEKIYKDC GKPSIIEDLL GIISSQPAPS NGIEFDSLAT ERSVASSVGS LAHSNELNNN
301: WGVYGKACKL DKPCTVDEVH LRRFDGLLEN GGVHRCAVAS ITVKAPVCEV WKVLTSYESL PEIVPNLAIS KILSRDNNKV RILQEGCKGL LYMVLHARAV
401: LDLHEIREQE IRFEQVEGDF DSLEGKWIFE QLGSHHTLLK YTVESKMRKD SFLSEAIMEE VIYEDLPSNL CAIRDYIEKR GEKSSESCKL ETCQVSEETC
501: SSSRAKSVET VYNNDDGSDQ TKQRRRIPGL QRDIEVLKSE ILKFISEHGQ EGFMPMRKQL RLHGRVDIEK AITRMGGFRR IALMMNLSLA YKHRKPKGYW
601: DNLENLQEEI GRFQQSWGMD PSFMPSRKSF ERAGRYDIAR ALEKWGGLHE VSRLLALNVR HPNRQLNSRK DNGNTILRTE STEADLNSTV NKNNKPYVSQ
701: DTEKWLYNLK DLDINWVQY
Arabidopsis Description
At5g08720 [Source:UniProtKB/TrEMBL;Acc:Q9C5A5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.