Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G524400.1 | Wheat | plastid | 76.35 | 79.58 |
| TraesCS3D01G529700.1 | Wheat | plastid | 73.31 | 79.49 |
| EES02141 | Sorghum | plastid | 54.73 | 58.27 |
| Zm00001d041961_P001 | Maize | plastid | 49.66 | 50.87 |
| GSMUA_Achr5P18420_001 | Banana | cytosol | 38.85 | 46.37 |
| Solyc01g068620.2.1 | Tomato | nucleus | 37.84 | 38.62 |
| KRH33686 | Soybean | plastid | 34.46 | 37.5 |
| VIT_07s0005g02400.t01 | Wine grape | plastid | 35.81 | 37.19 |
| CDX91843 | Canola | plastid | 34.46 | 35.79 |
| CDX74389 | Canola | plastid | 34.46 | 35.79 |
| Bra000919.1-P | Field mustard | plastid | 34.46 | 35.79 |
| Bra036320.1-P | Field mustard | plastid | 34.46 | 35.42 |
| CDY07128 | Canola | plastid | 34.46 | 35.17 |
| AT4G01650.1 | Thale cress | plastid | 34.12 | 35.07 |
| CDY58222 | Canola | plastid | 33.78 | 32.47 |
| PGSC0003DMT400037743 | Potato | mitochondrion | 3.38 | 9.62 |
| HORVU5Hr1G118480.8 | Barley | mitochondrion | 18.92 | 8.87 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G114370.2 | EnsemblPlantsGene:HORVU3Hr1G114370 | Gene3D:3.30.530.20 | InterPro:COQ10_START | InterPro:IPR023393 | InterPro:START-like_dom_sf |
| ncoils:Coil | PANTHER:PTHR34060 | PANTHER:PTHR34060:SF1 | PFAM:PF03364 | SEG:seg | SUPFAM:SSF55961 |
| UniParc:UPI000B47C76F | UniProt:A0A287MSI4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:690901211..690903957
Molecular Weight (calculated)
32840.1 Da
IEP (calculated)
5.173
GRAVY (calculated)
-0.403
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: ALQIKGKAEA LPAMAMPSTA SCCFASSSSS PRPTHTAASW TPARIRLGSR SALSRSPLRL SFSSAEPAPD VAGDDGEYTD REVEEDRDER YGFEMEVRKL
101: PGKKNRRLVR ARVRVGAPLQ AVWATLTDYE GLAGFIPGLS ECRLLDQDKA FARLYQVGEQ DLALGFKFNA KGTIDCYEGE MELLPESGGR RREIAFNMVE
201: GDFKVFEGKW SVHEVDGTTD KGGEISAGQE FQTTLSYVVE LEPKLWVPVR LLEGRICKEI KTNLVCIREE AERVQRLQGT RGMFSPTSVM LFDPCD
101: PGKKNRRLVR ARVRVGAPLQ AVWATLTDYE GLAGFIPGLS ECRLLDQDKA FARLYQVGEQ DLALGFKFNA KGTIDCYEGE MELLPESGGR RREIAFNMVE
201: GDFKVFEGKW SVHEVDGTTD KGGEISAGQE FQTTLSYVVE LEPKLWVPVR LLEGRICKEI KTNLVCIREE AERVQRLQGT RGMFSPTSVM LFDPCD
001: MQSSPILLDF SSAFHHPRAA ALATTSGLTN SHSPTKKYRL ITSFSPSSTL LASSRRCFTC RFGDSSPRFN SNEDETETET DDEDDYCLTD GKTEELVVGD
101: DGVLIELKKL EKSSRRIRSK IGMEASLDSV WSVLTDYEKL SDFIPGLVVS ELVEKEGNRV RLFQMGQQNL ALGLKFNAKA VLDCYEKELE VLPHGRRREI
201: DFKMVEGDFQ LFEGKWSIEQ VSII
101: DGVLIELKKL EKSSRRIRSK IGMEASLDSV WSVLTDYEKL SDFIPGLVVS ELVEKEGNRV RLFQMGQQNL ALGLKFNAKA VLDCYEKELE VLPHGRRREI
201: DFKMVEGDFQ LFEGKWSIEQ VSII
Arabidopsis Description
Polyketide cyclase / dehydrase and lipid transport protein [Source:UniProtKB/TrEMBL;Acc:Q9M120]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.