CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036320.1-P	Field mustard	plastid	93.45	94.1
CDY58222	Canola	plastid	86.9	81.82
CDX91843	Canola	plastid	74.14	75.44
CDX74389	Canola	plastid	72.76	74.04
AT4G01650.1	Thale cress	plastid	71.03	71.53
GSMUA_Achr5P18420_001	Banana	cytosol	37.24	43.55
KRH33686	Soybean	plastid	40.34	43.01
PGSC0003DMT400002199	Potato	mitochondrion	42.41	42.41
VIT_07s0005g02400.t01	Wine grape	plastid	40.69	41.4
Solyc01g068620.2.1	Tomato	nucleus	40.69	40.69
TraesCS3A01G524300.1	Wheat	cytosol	17.93	40.31
TraesCS3D01G529700.1	Wheat	plastid	32.76	34.8
EES02141	Sorghum	plastid	33.1	34.53
HORVU3Hr1G114370.2	Barley	plastid	35.17	34.46
TraesCS3A01G524400.1	Wheat	plastid	33.1	33.8
Zm00001d041961_P001	Maize	plastid	31.72	31.83
CDX69927	Canola	plastid	21.38	8.52
CDY21561	Canola	plastid	21.03	8.46

Protein Annotations

EnsemblPlants:CDY07128	EnsemblPlantsGene:GSBRNA2T00123476001	Gene3D:3.30.530.20	InterPro:COQ10_START	InterPro:IPR023393	InterPro:START-like_dom_sf
PANTHER:PTHR34060	PANTHER:PTHR34060:SF1	PFAM:PF03364	ProteinID:CDY07128	ProteinID:CDY07128.1	SEG:seg
SUPFAM:SSF55961	UniParc:UPI0004EE14DA	MapMan:35.2	:	:	:

Description

BnaCnng01430D

Coordinates

chrLK031975:+:388111..389743

Molecular Weight (calculated)

32444.3 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.313

Length

290 amino acids

Sequence
(BLAST)

001: MQIVSDFSSA FPHPGAAALA TTTTSTSSIS ISHSPAVKFH STNVSPSSKL LLASSSSSRR CFTCRFDNNS PRFDSNDDDY YNEDENETNE DDCLIECLAD
101: GKTEDGVVLI SVEKLEKSSR RIRSKVGMEA SLDAVWSVLT DYEKLSEFIP GLVVSELVEK EGNRVRLFQM GQQSIALGLK FNAKAVLDCF EKELEILPHG
201: RRREIDFKMV EGDFQLFEGK WSIEQLDKGE ASDLQFKDFP TTLAYTVDVK PKMWLPVRLV EGRLCNEIKT NLLSVRDAAQ KVIEGVIHDL

Best Arabidopsis Sequence Match ( AT4G01650.1 )
(BLAST)

001: MQSSPILLDF SSAFHHPRAA ALATTSGLTN SHSPTKKYRL ITSFSPSSTL LASSRRCFTC RFGDSSPRFN SNEDETETET DDEDDYCLTD GKTEELVVGD
101: DGVLIELKKL EKSSRRIRSK IGMEASLDSV WSVLTDYEKL SDFIPGLVVS ELVEKEGNRV RLFQMGQQNL ALGLKFNAKA VLDCYEKELE VLPHGRRREI
201: DFKMVEGDFQ LFEGKWSIEQ LDKGIHGEAL DLQFKDFRTT LAYTVDVKPK MWLPVRLVEG RLCKEIRTNL MSIRDAAQKV IEGVIHDL

Arabidopsis Description

Polyketide cyclase / dehydrase and lipid transport protein [Source:UniProtKB/TrEMBL;Acc:Q9M120]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.