CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036320.1-P	Field mustard	plastid	85.71	91.67
CDY07128	Canola	plastid	81.82	86.9
CDX74389	Canola	plastid	67.53	72.98
CDX91843	Canola	plastid	64.94	70.18
AT4G01650.1	Thale cress	plastid	64.61	69.1
GSMUA_Achr5P18420_001	Banana	cytosol	35.39	43.95
KRH33686	Soybean	plastid	38.64	43.75
PGSC0003DMT400002199	Potato	mitochondrion	39.94	42.41
TraesCS3A01G524300.1	Wheat	cytosol	17.21	41.09
Solyc01g068620.2.1	Tomato	nucleus	38.64	41.03
VIT_07s0005g02400.t01	Wine grape	plastid	37.66	40.7
TraesCS3D01G529700.1	Wheat	plastid	30.84	34.8
HORVU3Hr1G114370.2	Barley	plastid	32.47	33.78
TraesCS3A01G524400.1	Wheat	plastid	30.52	33.1
EES02141	Sorghum	plastid	29.22	32.37
Zm00001d041961_P001	Maize	plastid	28.57	30.45
CDX69927	Canola	plastid	21.75	9.2
CDY21561	Canola	plastid	21.43	9.15

Protein Annotations

EnsemblPlants:CDY58222	EnsemblPlantsGene:GSBRNA2T00023282001	Gene3D:3.30.530.20	InterPro:COQ10_START	InterPro:IPR023393	InterPro:START-like_dom_sf
PANTHER:PTHR34060	PANTHER:PTHR34060:SF1	PFAM:PF03364	ProteinID:CDY58222	ProteinID:CDY58222.1	SEG:seg
SUPFAM:SSF55961	UniParc:UPI0004EDF104	UniProt:A0A078J382	MapMan:35.2	:	:

Description

BnaA09g52170DBnaA09g52170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J382]

Coordinates

chrLK033647:+:35037..36825

Molecular Weight (calculated)

34692.6 Da

IEP (calculated)

8.108

GRAVY (calculated)

-0.288

Length

308 amino acids

Sequence
(BLAST)

001: MQIVSDFSSA FPHPRAAALA TTSTSSISIS HSPAIKFHSA NVSPSSSLLL ASSSSSTRRC FTCRFDNNSP RFDPSDGDYY NETESDDCLT ECLADGKTED
101: GVVLISVEKL EKSSRRIRSK VGIEASLDAV WSVLTDYEKL SEFIPGLVVS ELVEKEGNRV RLFQMGQQSI ALGLKFNAKA VLDCFEKELE ILPRGRRREI
201: DFKMVEGDFQ LFEGKWSIEQ LDKGEASDLQ FKDFPTTLAY TVDVKPKMWL PVRLVEGRLC NEIKTNLLSV RDAAQKVIEG EKKKKKKKSL KVLFMIFEFF
301: FPIKTKLK

Best Arabidopsis Sequence Match ( AT4G01650.1 )
(BLAST)

001: MQSSPILLDF SSAFHHPRAA ALATTSGLTN SHSPTKKYRL ITSFSPSSTL LASSRRCFTC RFGDSSPRFN SNEDETETET DDEDDYCLTD GKTEELVVGD
101: DGVLIELKKL EKSSRRIRSK IGMEASLDSV WSVLTDYEKL SDFIPGLVVS ELVEKEGNRV RLFQMGQQNL ALGLKFNAKA VLDCYEKELE VLPHGRRREI
201: DFKMVEGDFQ LFEGKWSIEQ LDKGIHGEAL DLQFKDFRTT LAYTVDVKPK MWLPVRLVEG RLCKEIRTNL MSIRDAAQKV IEGVIHDL

Arabidopsis Description

Polyketide cyclase / dehydrase and lipid transport protein [Source:UniProtKB/TrEMBL;Acc:Q9M120]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.