CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000919.1-P	Field mustard	plastid	96.14	96.14
CDX91843	Canola	plastid	91.23	91.23
AT4G01650.1	Thale cress	plastid	78.25	77.43
CDY07128	Canola	plastid	74.04	72.76
CDY58222	Canola	plastid	72.98	67.53
GSMUA_Achr5P18420_001	Banana	cytosol	38.6	44.35
KRH33686	Soybean	plastid	41.75	43.75
Solyc01g068620.2.1	Tomato	nucleus	43.16	42.41
TraesCS3A01G524300.1	Wheat	cytosol	18.95	41.86
PGSC0003DMT400002199	Potato	mitochondrion	42.11	41.38
VIT_07s0005g02400.t01	Wine grape	plastid	40.7	40.7
EES02141	Sorghum	plastid	36.14	37.05
TraesCS3D01G529700.1	Wheat	plastid	34.04	35.53
HORVU3Hr1G114370.2	Barley	plastid	35.79	34.46
TraesCS3A01G524400.1	Wheat	plastid	34.04	34.15
Zm00001d041961_P001	Maize	plastid	34.04	33.56
CDX69927	Canola	plastid	21.75	8.52
CDY21561	Canola	plastid	21.4	8.46

Protein Annotations

EnsemblPlants:CDX74389	EnsemblPlantsGene:GSBRNA2T00112210001	Gene3D:3.30.530.20	InterPro:COQ10_START	InterPro:IPR023393	InterPro:START-like_dom_sf
PANTHER:PTHR34060	PANTHER:PTHR34060:SF1	PFAM:PF03364	ProteinID:CDX74389	ProteinID:CDX74389.1	SEG:seg
SUPFAM:SSF55961	UniParc:UPI0004EDCB3A	MapMan:35.2	:	:	:

Description

BnaA03g26580D

Coordinates

chrLK031800:-:2633813..2635754

Molecular Weight (calculated)

32138.5 Da

IEP (calculated)

4.646

GRAVY (calculated)

-0.241

Length

285 amino acids

Sequence
(BLAST)

001: MQLLDFSSAF LHPRAAALAT TSGVTISTKF HSTNVLSPYF PPSSTLHLPS PPSRRCFTCR IGDDDYCNED ESETDEDDCL VDCLTDEKSE ELVVVGDDGV
101: LIEVKKLEKS SRRIRSKIGM EASLDAVWSV LTDYEKLSDF IPGLVVSELV EKEGNRVRLF QMGQQNLALG LKFNAKAVLD CFEKELQILP NGRRREIDFK
201: MVEGDFQLFE GKWSIEQLDK GIQGEALDLQ FKDFPTTLAY TVDVKPKMWL PVRLVEGRLC KEIKTNLLSI RDTAQKVIEG VIHDL

Best Arabidopsis Sequence Match ( AT4G01650.1 )
(BLAST)

001: MQSSPILLDF SSAFHHPRAA ALATTSGLTN SHSPTKKYRL ITSFSPSSTL LASSRRCFTC RFGDSSPRFN SNEDETETET DDEDDYCLTD GKTEELVVGD
101: DGVLIELKKL EKSSRRIRSK IGMEASLDSV WSVLTDYEKL SDFIPGLVVS ELVEKEGNRV RLFQMGQQNL ALGLKFNAKA VLDCYEKELE VLPHGRRREI
201: DFKMVEGDFQ LFEGKWSIEQ LDKGIHGEAL DLQFKDFRTT LAYTVDVKPK MWLPVRLVEG RLCKEIRTNL MSIRDAAQKV IEGVIHDL

Arabidopsis Description

Polyketide cyclase / dehydrase and lipid transport protein [Source:UniProtKB/TrEMBL;Acc:Q9M120]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.